Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_3821
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Entry
SHJGH_3821 CDS
T02531
Name
(GenBank) DNA-binding protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho03030
DNA replication
sho03430
Mismatch repair
sho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHJGH_3821
03430 Mismatch repair
SHJGH_3821
03440 Homologous recombination
SHJGH_3821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sho03032
]
SHJGH_3821
03400 DNA repair and recombination proteins [BR:
sho03400
]
SHJGH_3821
Enzymes [BR:
sho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHJGH_3821
DNA replication proteins [BR:
sho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SHJGH_3821
DNA repair and recombination proteins [BR:
sho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SHJGH_3821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AGF63486
LinkDB
All DBs
Position
complement(4360411..4361400)
Genome browser
AA seq
329 aa
AA seq
DB search
MARKTANDDPLAPVTLAVGQEDLLLDRAVQEVVAAAKAADADTDVRDLTPDQLQPGTLAE
LTSPSLFAERKVVVVRNAQDLSADTVKDVRAYLGSPAEEITLVLLHAGGAKGKGLLDAAR
KAGAREVACPKMTKPADRLAFVRGEFRSSGRSATPEACQTLCDAIGSDLRELASAVSQLV
ADVEGTIDEAVVRRYYTGRAEASSFTVADRAVEGRTAEALEALRWSLATGVAPVMITSAL
AQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVAVALRAVAEADAG
VKGGGDDPEYALEKAVVTIARAARSRGRG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagactgcgaatgacgaccctctcgccccggtgaccctcgccgtgggccag
gaggacctcctgctcgaccgtgccgtgcaggaggtggtggccgccgccaaggccgccgac
gccgacacggacgtacgtgacctgaccccggaccagctacagcccggcacactcgccgag
ctgaccagcccgtcgctcttcgccgagcgcaaggtcgtggtcgtacgcaacgcgcaggac
ctgtccgccgacacggtcaaggacgtgagggcgtacctcggttcgcccgccgaggagatc
acgctggtgctgctgcacgccggcggcgccaagggcaaagggctgctggacgccgcgcgc
aaggcgggggcgcgggaggtggcctgcccgaagatgaccaagcccgcggatcggctggcc
ttcgtgcggggggagttccgttcgtccgggcggtcggccacgcccgaggcgtgccagacg
ctctgcgacgccatcgggagcgatctgcgggagctggcctcggcggtctcgcagttggtc
gccgacgtggaagggacgatcgacgaggcggtcgtcaggcggtactacaccgggcgtgcc
gaggcgtccagcttcacggtcgccgaccgggccgtggagggccggacggcggaggcgctg
gaggcgctcagatggtcgctggcgacgggcgtggcgccggtgatgatcaccagtgcgctg
gcgcagggcgtgcgggcgatcgggaagctgtcctcggcccggggcggccggccggccgat
ctggcgcgtgagctgggcatgccgccgtggaagatcgaccgggtacggcagcagatgcgg
ggctggacgccggacggggtcgcggtggcgctcagggcggtcgccgaggcggacgccggg
gtgaagggaggcggggacgatcccgagtacgcgttggagaaggcggtcgtgacgatcgcc
cgcgccgcccgctcccgcggacgcggatag
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