Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_3950
Help
Entry
SHJGH_3950 CDS
T02531
Name
(GenBank) putative ABC transporter ATP-binding protein
KO
K06020
energy-dependent translational throttle protein EttA
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sho03016
]
SHJGH_3950
Transfer RNA biogenesis [BR:
sho03016
]
Prokaryotic type
tRNA transport factors
tRNA export factors
SHJGH_3950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
AAA_29
AAA_23
AAA_22
DLIC
AAA_15
AAA_27
AAA_13
ORC-CDC6-like
Rad17
NB-ARC
nSTAND3
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
AGF63615
LinkDB
All DBs
Position
complement(4510644..4512287)
Genome browser
AA seq
547 aa
AA seq
DB search
MRKARKAHGDKVILDDVTLNFLPGAKIGVVGPNGAGKSTVLKIMAGLEQPSNGDAFLSPG
YSVGILLQEPPLNEEKTVLENVQEGVAEIKGKLDRFNEIAELMATDYSDALLDEMGKLQE
ELDHANAWDLDAQLEQAMDALGCPPGDWPVTNLSGGEKRRVALCKLLLEQPDLLLLDEPT
NHLDAESVNWLEQHLAKYPGTVVAVTHDRYFLDNVAGWICEVDRGRLHGYEGNYSKYLET
KAARLKVEGQKDAKRQKRLKEELEWVRSNAKGRQAKSKARLARYEEMAAEADKMRKLDFE
EIQIPPGPRLGNVVVEVNDLHKGFGDKVLVDGLSFTLPRNGIVGVIGPNGAGKTTLFKMI
QGLETPDSGEIKVGETVKISYVDQSRENIDPKKTLWEVVSDGLDYINVGQVEMPSRAYVS
AFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNLLLLDEPTNDLDVETLSSLENALLD
FPGCAVVVSHDRWFLDRVATHILAYEGESKWFWFEGNFESYEKNKIERLGPDAARPHRAT
YKKLTRG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaggcgcgcaaggcgcacggcgacaaggtgatcctcgacgacgtcaccctgaac
ttcctccccggggcgaagatcggcgtcgtcggcccgaacggtgccggtaagtcgaccgtg
ctgaagatcatggcggggctggagcagccgtccaacggtgacgccttcctctcgcccggc
tacagcgtcggcatcctgctccaggagcccccgctcaacgaggagaagaccgtcctggag
aacgtccaggagggtgtcgccgagatcaagggcaagctcgaccggttcaacgagatcgcc
gagctgatggcgaccgactactccgacgcgctgctcgacgagatgggcaagctccaggag
gagctggaccacgcgaacgcgtgggacctcgacgcccagcttgagcaggccatggacgcg
ctgggctgcccgcccggcgactggccggtgaccaacctctccggtggtgagaagcgccgc
gtcgcgctctgcaagctgctgctggagcagcccgacctgctgctcctggacgagcccacc
aaccacctcgacgccgagtcggtgaactggctggagcagcacctggccaagtacccgggc
accgtcgtggccgtcacccacgaccggtacttcctggacaacgtcgccgggtggatctgc
gaggtcgaccgtggccgcctgcacggctacgagggcaactactccaagtacctggagacc
aaggccgcccgcctcaaggtcgagggccagaaggacgccaagcgccagaagcggctcaag
gaagagctggagtgggtgcggtcgaacgccaaggggcggcaggccaagtccaaggcccgt
ctcgcgcggtacgaggagatggccgccgaggccgacaagatgcggaagctggacttcgag
gagatccagatcccgccgggcccgcgcctgggcaacgtcgtcgtcgaggtcaacgacctg
cacaagggcttcggcgacaaggtcctcgtggacgggctgtccttcacgctgccgcgcaac
ggcatcgtgggtgtcatcggcccgaacggcgctggcaagaccactctcttcaagatgatc
cagggtctggagacgccggactccggtgagatcaaggtcggcgagaccgtcaagatctcc
tacgtcgaccagagccgcgagaacatcgacccgaagaagacgctgtgggaggtcgtgtcc
gacgggctcgactacatcaacgtcggccaggtcgagatgccgagccgggcgtacgtgtcg
gcgttcgggttcaagggcccggaccagcagaagccggccggtgtcctctccggcggtgag
cgcaaccggctcaacctggcgctgaccctgaagcagggcggcaacctgctgctcctcgac
gagcccaccaacgacctcgacgtcgagacgctctccagcctggagaacgccctgctggac
ttccccggctgcgccgtcgtcgtctcccacgaccggtggttcctcgaccgcgtcgcgacg
cacatcctcgcctacgagggtgagtcgaagtggttctggttcgagggcaacttcgagtcg
tacgagaagaacaagatcgagcggctcggcccggacgccgcgcgtccgcaccgcgccacc
tacaagaagctgacccggggctga
DBGET
integrated database retrieval system
