Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_4893
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Entry
SHJGH_4893 CDS
T02531
Name
(GenBank) ABC transporter ATP-binding protein
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SHJGH_4893
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sho02000
]
SHJGH_4893
Transporters [BR:
sho02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SHJGH_4893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_22
RsgA_GTPase
AAA_29
AAA_33
AAA_16
AAA_24
NACHT
nSTAND1
AAA_25
MMR_HSR1
ATP-synt_ab
nSTAND3
DUF87
AAA_30
AAA_18
NB-ARC
MobB
AAA_7
TsaE
AAA_28
APS_kinase
SRP54
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
AGF64556
LinkDB
All DBs
Position
complement(5568420..5571920)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKPIDPRLLRYARATRLFLVAVIGLGAVGAGLVIAQAMLVAEIVVGAFQHGQSVAELRTP
LLLLAAVAVGRSIVAWLTELSAHRASAAVKSELRGRLLDRAAALGPGWLSGQRTGSLVTL
ATRGVDALDDYFSRYLPQLGLAVVVPVAVLARIVTEDWVSAAIIVCTLPLIPVFMMLIGW
ATQSRMERQWRLLSRLSGHFLDVVAGLPTLKVFGRAKAQAESIRRITGEYRQATLRTLRI
AFLSSFALELLATLSVALVAVTIGMRLVHGDMDLSIGLVILVLAPEAYLPLRQVGAQYHA
AAEGLAAAEEIFSVLETAVPDSGTGAVPTGGVAFEGVSVRYPGRSSDAVTDVSFTVEPGE
TVALVGPSGVGKSTLLSVLLGFVRPTEGRVRIGGADLAGLDLAEWRSRVAWVPQRPHLYA
GTIAENVRLARPDADDGAVRRALRDAGAWEFVTALPEGVDTVLGEDGAGLSAGQRQRLAL
ARAFLVDRPVLLLDEPTAALDGGTEGEVVAAVRRLAAGRTVLLVVHRPALLGVADRVVRL
GGAAAVPSPESSGPTTALRPLDPRPHPPAPRLGRLDGAPGQRAGGGVLRRVRGIGGGRRG
RLVGALGLGSLALGCAVGLMATSGWLISRASQQPPVLYLMVAVTATRAFGIGRAVFRYAE
RLVSHDAVLRMLADTRVAVYRRLERLAPAGLRGARRGDLLTRLVADVDAFQDYWLRWLLP
AGVALTVSAASVGFTAWLLPEAGAVLAAGLLAAGAGVPLLTSTAARRTERRLAPARGVLA
TRVTDLLTGTAELTVAGALPARTDAARRADGTLTRIAARAAAVTGLGDALTALVSGLTVT
VTAAFGAQAVTAGRLSGVAMAVVVLTPLAAFEAVLGLPLAARYRQRVRRSAERVYEVLDA
PEPVREPVSPRQAPASPFPVVVKGVVARYAGQRREALAGLDLTLEEGRRIAVVGASGSGK
TTLAQVLLRFLDAEAGSYTLAGVDACALDGDDVRRFVGLCAQDAHLFDSSVRENLLLARK
DATEADLRGALARARLLDWVDALPDGLDTLVGEHGARLSGGQRQRLALARALLAGFPVLV
LDEPAEHLDLPTADALTADLLAATQGRTTLLITHRLAGLDAVDEVIVLDAGRVVQRGPYE
RLITEDGPLREMARREAEAESLVGVG
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccaatcgatccccgcctgctgcggtacgcccgcgccacccgtctcttcctcgtc
gcggtcatcggtctgggggccgtcggcgccggactggtcatcgctcaggccatgctcgtc
gccgagatcgtcgtcggagcgttccagcacgggcagtcggtcgccgaactgcgtactccc
ctgctgctgttggccgccgtggccgtcgggcgatcgatcgtcgcgtggctcaccgagctc
tcggcccatcgcgcgagcgcggccgtgaagtcggagctgcgcgggcggctgctcgaccgg
gcggcggcgctcggtccggggtggctgagcggtcagcggaccggctcgctggtcaccctg
gccacgcgtggggtcgacgccctggacgactacttctcgcgctacctgccgcagttgggg
ctcgccgtggtcgtgcccgtggcggtgctggcgcggatcgtcaccgaggactgggtgtcg
gcggcgatcatcgtctgcaccctgccgctgattccggtcttcatgatgctgatcggctgg
gcgacccagtcccggatggagcggcagtggcggttgctgtcccggttgtccggccacttc
ctggacgtggtcgcgggactgcccacgctgaaggtgttcggccgggccaaggcgcaggcg
gagtccatccggcggatcaccggcgagtaccggcaggccaccctgcggacgctgcggatc
gccttcctgtcctcgttcgcgctggagttgctggccacgctgtcggtcgcgctggtcgcc
gtgacgatcgggatgcggctcgtccacggagacatggatctctccatcggtctggtgatc
ctcgtgctggcgcccgaggcctatctgccgttgcggcaggtgggtgcgcagtaccacgcg
gcggcggaggggcttgccgcggcggaggagatcttcagcgtgctggagacggcggtgccg
gactcgggtaccggtgcggtgccgacgggtggtgtggccttcgagggggtcagcgttcgg
tatccggggcggtcctcggatgcggtgaccgatgtgtcgttcaccgtcgagcctggtgag
accgttgcgctggtcgggccgagcggggtgggcaagtcgacgctgctgagtgtgttgctg
gggttcgtacggcctaccgaggggcgggtgcggatcgggggcgcggatctcgccgggctg
gatctggcggagtggcggtcgagggtcgcgtgggtgccgcagaggccgcatctgtacgcc
gggacgatcgcggagaacgtgcggctggcccggcctgacgccgacgacggtgccgtgcgg
cgggcgctgcgggacgcgggggcgtgggagttcgtgacggcgctcccggagggggtcgac
accgtgctcggggaggacggggcgggactgtcggcggggcagcggcagcggttggcgttg
gctcgggcgtttctcgtggatcggcctgtgctgttgctggatgagccgacggctgcgttg
gacggggggaccgagggggaggtcgtggccgcggtgcgaaggcttgccgcggggcggacc
gtgctgcttgtcgtgcatcggcccgcgttgttgggggtcgctgaccgggtggtacggctc
ggaggtgccgctgctgttccgtccccggagtccagtgggcccaccacggcgctccgcccc
ctggacccccgccctcacccacccgccccccgactcggtcgtctggatggtgcgccgggg
cagcgggccgggggcggtgtgttgcggcgggttcgggggatcggcggggggcggcgaggg
cggttggtcggtgccctggggctggggagtcttgccctggggtgtgccgtggggctcatg
gccacctccggctggctcatctcgcgggcgtcccagcagcccccggtgctgtacctgatg
gtggccgtgaccgcgacccgggcgttcgggatcgggcgggccgtcttccggtatgccgag
cggctggtgtcgcacgacgccgtgctgcggatgctggccgacacccgggtcgcggtgtac
cggcggctggaacgcctggcccccgcggggctgcgcggcgcccggcgcggtgatctgctc
acccggctggtcgcggacgtggacgcgttccaggactactggctgcgctggctgctgccc
gccggagtggcgctcaccgtgtccgccgcctccgtcggcttcacggcctggctgctgccc
gaggccggtgccgtcctcgcggccggcctgctggccgccggtgcgggtgtccccctgctg
acctcgaccgccgcccggcggaccgagcggcggctggcgcccgcccggggagtgctcgcg
acccgtgtgaccgacctgctcaccggcacggccgagctgaccgtcgccggtgcgctgccg
gcccgtacggacgcggcccggcgggccgacggcaccctcacccggatcgccgcgcgcgcc
gccgccgtcaccgggctcggggacgcgctcaccgcgctcgtctccgggctgaccgtcacg
gtcaccgcggcgttcggcgcccaggcggtgacggccggccggctgagcggtgtggcgatg
gccgtggtcgtcctgacccccctcgccgccttcgaggccgtactagggctgccgctcgcc
gcgcggtaccggcagcgcgtgcggcgcagcgcggagcgggtgtacgaggtcctggacgcc
cccgagcccgtgcgcgagcccgtctcgccccggcaggcgcccgcctcgccgttcccggtg
gtcgtcaagggagtggtcgcgcggtacgcggggcagcggcgggaggcgctcgccgggctg
gacctgacgctggaggaggggcgccggatcgcggtggtgggggcgtccggttccggcaag
acgaccctcgcgcaggtgctgctgcggttcctcgacgcggaggcgggctcgtacacgctc
gccggtgtggacgcgtgcgcgctggacggtgacgacgtacggcggttcgtcggactgtgc
gcgcaggacgcgcatctcttcgacagctcggtacgcgagaacctgctcctcgccaggaag
gacgccaccgaggccgacctgcgcggagcgctggcccgggcacggctgctggactgggtg
gacgcgttgcccgacggcctggacacgctcgtcggcgagcacggggcgcggctgtccggc
gggcagcggcagcggctggcgctggcccgcgcgctgctggccggtttccccgtgctggtc
ctggacgagcccgccgagcacctggatctgccgacggcggatgcgctgaccgccgatctg
ctggccgccacgcagggccgtacgacgctgctgatcacgcaccggctggcgggactcgac
gcggtggacgaggtgatcgtgctcgacgcgggccgggtggtgcagcgagggccgtacgag
cggctgatcaccgaggacgggccgctgcgggagatggcacgccgggaagccgaggcggag
tcgctggtgggggtgggctga
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