Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_4960
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Entry
SHJGH_4960 CDS
T02531
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sho03032
]
SHJGH_4960
03400 DNA repair and recombination proteins [BR:
sho03400
]
SHJGH_4960
Enzymes [BR:
sho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SHJGH_4960
DNA replication proteins [BR:
sho03032
]
Prokaryotic type
DNA Topoisomerases
SHJGH_4960
DNA repair and recombination proteins [BR:
sho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SHJGH_4960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AGF64623
LinkDB
All DBs
Position
5645570..5647627
Genome browser
AA seq
685 aa
AA seq
DB search
MADSGNPNENIPSTDAGMNAEATESAAASASYDASAITVLEGLDAVRKRPGMYIGSTGER
GLHHLVYEVVDNSVDEALAGYADTIDVTILADGGVRVVDNGRGIPVGIVPSEGKPAVEVV
LTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTKVAVEVRTDGHRWTQDYKMGVPTAPL
VKHEATQETGTSVTFWADPEIFETTEYSFETLSRRFQEMAFLNKGLTIRLTDERESAKAT
SGADEAGADEKAEVKTVTYHYEGGIVDFVKYLNSRKGEAVHPTVVSLEAEDKDKSLSLEV
AMQWNSGYTEGVYSFANIIHTHEGGTHEEGFRAALTSLINKYARDKKLLREKDDNLTGDD
IREGLTAIISVKLSEPQFEGQTKTKLGNTEAKTFVQKAVYEHLNDWLDRNPVEAADIIRK
GIQAATARVAARKARDLTRRKGLLESASLPGKLADCQSNDPAKCEIFIVEGDSAGGSAKS
GRNPQYQAILPIRGKILNVEKARIDKILQNQEIQALISAFGTGVHEDFDIEKLRYHKIIL
MADADVDGQHISTLLLTFLFRFMRPLVEAGHVYLSRPPLYKIKWGRDDVEYAYSDRERDA
LIEMGRQRGKRVREDSIQRFKGLGEMNAEELRVTTMDQEHRVLGQVTLDDAAQADDLFSV
LMGEDVEARRQFIQRNAKDVRFLDI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtggccgattccggcaaccccaacgagaacatcccgtccaccgacgccggcatgaacgcc
gaggccacggagtccgccgcggcctccgcgtcctacgacgccagcgccatcaccgtgctc
gaagggctggacgcggtccgcaagcggcccggcatgtacatcggctccacgggcgagcgc
ggtctgcaccacctggtgtacgaggtcgtcgacaactcggtcgacgaggcgctggccggt
tacgcggacaccatcgacgtgacgatcctcgccgacggcggcgtgcgcgtcgtcgacaac
ggccgtggcatcccggtgggcatcgtgccctccgagggcaagccggccgtcgaggtcgtg
ctcaccgtgctgcacgcgggcggcaagttcggcggcggcgggtacgccgtctccggcggt
ctgcacggtgtcggtgtgtccgtcgtcaacgcgctgtccaccaaggtcgccgtcgaggtg
aggaccgacggccaccgctggacgcaggactacaagatgggcgtcccgacggcgccgctg
gtcaagcacgaggcgacgcaggagaccggtacgtcggtcaccttctgggccgacccggag
atcttcgagaccaccgagtactccttcgagacgctgtcccggcgtttccaggagatggcg
ttcctcaacaagggcctgacgatccggctcaccgacgagcgcgagtcggcgaaggccacg
agcggcgcggacgaggcgggtgcggacgagaaggccgaggtcaagaccgtcacgtaccac
tacgagggcggcatcgtcgacttcgtgaagtacctcaactcccgcaagggggaggcggtg
caccccacggtcgtctcgctggaggccgaggacaaggacaagagcctgtcccttgaggtc
gccatgcagtggaacagcggctacaccgagggcgtgtactccttcgcgaacatcatccac
acccacgagggcggtacgcacgaggagggcttccgggcggccctcaccagcctcatcaac
aagtacgcgcgcgacaagaagctgctgcgcgagaaggacgacaacctcaccggtgacgac
atccgcgagggtctgaccgcgatcatctcggtcaagctgagcgagccgcagttcgagggc
cagacgaagaccaagctgggcaacacggaggcgaagaccttcgtgcagaaggcggtctac
gagcacctcaacgactggctggaccgcaacccggtcgaggccgcggacatcatccgcaag
ggcatccaggcggccaccgcgcgcgtggcggcccgcaaggcccgtgacctgacccggcgc
aaggggctgctggagtcggcgtcgctgccgggcaagctggccgactgccagtccaacgac
ccggccaagtgcgagatcttcatcgtcgagggcgactccgccggcggctcggccaagtcc
ggccggaacccgcagtaccaggcgatcctcccgatccgcggcaagatcctgaacgtggag
aaggcccggatcgacaagatcctccagaaccaggagatccaggcgctgatctcggccttc
ggcacgggtgtgcacgaggacttcgacatcgagaagctccgctaccacaagatcatcctg
atggcggacgccgacgtcgacggccagcacatcagcaccctgctgctgaccttcctgttc
cgcttcatgcggccgctggtcgaggccgggcacgtgtacctgtcccgccccccgctgtac
aagatcaagtggggccgtgacgacgtggagtacgcctactcggaccgcgaacgcgacgcg
ctgatcgagatgggccgccagcgtggcaagcgcgtccgcgaggactcgatccagcgcttc
aagggtctcggcgagatgaacgccgaggagctgcgcgtgaccaccatggaccaggagcac
cgggtcctcggccaggtcaccctggacgacgccgcccaggccgacgacctgttctcggtc
ctcatgggcgaggacgtcgaggcccgtcgccagttcatccagcgcaacgccaaggacgtc
cgcttcctcgacatctga
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