Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_4963
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Entry
SHJGH_4963 CDS
T02531
Name
(GenBank) WD-40 repeat protein
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
nSTAND1
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
Ge1_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
PROPPIN
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_DCAF4
Motif
Other DBs
NCBI-ProteinID:
AGF64626
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All DBs
Position
complement(5651408..5654791)
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AA seq
1127 aa
AA seq
DB search
MVPGADPLGELVRRVPGLAAVAADARRAEREAARNPALPGCDAPHISRAVREAVAAWADR
ATGPDDRPVVIVDQFEEAFTLCADEVDRRVFIHFLHAACTPPPGAAGPAPVRVVLGIRAD
FYEQCLGYPELADALQHRHMVLGPLTSTELREAVTGPAKAVGLELEPGLAELIVREVSAD
GPRGAHDAGVLPLLSHALLATWQRRKAGRLTLAGYRAAGGIQGAVAATAERAWSGLDPAA
RAAARLLLLRLVRLGEDTQATRRRGTRRQLAEESSDPGKTEESLEALVRARLVTLDADTV
EITHEALLHAWPRLRHWIDEGRGDHLLRQRLEEDGRAWEDSGRDSSLLYRGSRLEQARGW
ARSAGDTYLTRSAVEFLAASVRLRKRSVWLSRAAVAALVALAVLAAGTAVIAWKQRDDAV
FEQVLAEADRVQHTDPSLAAQLDLVAHQLRPDDEGTYSRLISIVNAPLATPLSGHTGAVY
LTSFSPDGDTLATAGYDRTVRLWDVTDPHRPAPLGAPLTGHTSWVSSAVFSPDGRTLASA
GDDGTVRLWDVSDPAHARPLGTPLAGRQGTIYLVAFSPDGRTLATAGEDRTVRLWDITDP
RRPGALATLRGHGAAVRCVAFAPDGRTLATGGDDDTIRLWDLSAPRRPEPVRTLRGHTDL
VHSVAFSPDGHTLASGSADDTIRLWDVADPARAAAVGSPLTGHTGPVWSVAFSPDGVRLA
AASADSTASLWNVSDPGSPSQVGEPLAGSSGEMYALGFRPDGRTLATGSGDGKVRLWSVP
TSDMIGRSGAFRPDGRVLATAARDGRLRLWNVTRPGRPVLLGEPFMRADGDERSLMFSPD
GRTLAVLTGVRTVHLWNVTDPAHPVAAGPPLHLRTRFMGSDALAYSPDGRTLATAYDDRT
VQLWDVTDPGRPAPLGSPLTGHRGYINSLVFSPDGHTLASGSADSTIRLWNVTDRAHARP
LGTPLTDHSGPVNALAFGPDGHTLASGSDDDTVRLWNTADPAHAAPLGKPLTGHTEAVTS
LTFSAGGDTLASGGSDNTVRLWNVADPASATPIGQSMSPNAKTGNFLIFSPESHVLGVSS
GADTVRLWSLDADTAIRHICSVTRGVLTPQRWHEYLPRLGYDPPCGR
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
ttggtcccgggtgccgatccgctgggtgagctggtccgccgtgtccccggtctcgccgcc
gtcgccgccgacgcccgcagggccgagcgggaggcggcgcggaacccggcgctgccgggc
tgcgacgccccgcacatctcccgggcggtacgcgaggcggtcgcggcctgggcggaccgc
gcgacgggcccggacgaccggccggtcgtcatcgtggaccagttcgaggaggcgttcacc
ctctgcgccgacgaggtggaccggcgcgtcttcatccacttcctgcacgccgcctgcacc
ccgccccccggcgccgccggacccgcgcccgtccgggtcgtcctcggcatccgcgccgac
ttctacgagcagtgcctcggctacccggaactggccgacgcgctccagcaccggcacatg
gtgctcggcccgctgaccagcaccgaactgcgcgaggcggtgaccggtccggccaaggcg
gtggggctggagctggagccgggcctcgccgagctgatcgtgcgcgaggtgagcgccgac
ggcccgcgcggcgcgcacgacgcgggcgtgctgccgctgctctcgcacgccctgctggcc
acctggcagcgccggaaggccggccggctgacactggccggctaccgcgcggccggcggc
atccagggcgcggtcgcggcgaccgccgagcgcgcctggtccgggctggatccggcggcc
cgtgccgccgcccggctgctcctgctgcggctggtccggctgggcgaggacacccaggcc
acgcgccggcgcggcacccggcggcagctggcggaggagtcgtcggatcccggcaagacg
gaggagtcgctggaggccctggtgcgggcccggctggtgacgctggacgcggacaccgtg
gagatcacccacgaggcgctgctgcacgcctggcctcggctgcggcactggatcgacgag
ggccggggcgaccacctgctgcgccagcggctggaggaggacggccgggcctgggaggac
tcgggccgggacagctcgctgctgtaccgggggtcgcggctggagcaggcccgcggctgg
gcccggtcggccggggacacgtacctgacccggagcgcggtggagttcctggcggcctcg
gtgcggctgcgcaagcgctcggtgtggctgagccgggccgcggtggcggcgctggtggcg
ctggccgtgctcgcggccggtacggcggtgatcgcctggaagcagcgggacgacgccgtg
ttcgagcaggtgctcgccgaggccgaccgggtccagcacaccgatccgtccctggccgcc
cagctcgacctggtcgcgcaccagctccgccccgacgacgagggcacgtacagccgtctg
atctcgatcgtgaacgcgccgctggccaccccgctgtccggccacaccggcgccgtctac
ctcacctccttcagcccggacggcgacacgctggcgacggccggctacgaccgcacggtc
cggctgtgggacgtgaccgacccgcaccgcccggccccgctcggcgcgcccctgaccggc
cacaccagctgggtgagcagtgccgtcttcagcccggacggccgcaccctggccagcgcc
ggcgacgatggcacggtccggctgtgggacgtgtccgaccccgcgcacgcccgcccgctg
ggcacgccgctcgccggccgccagggcacgatctacctggtcgccttcagtcccgacggg
cgcacgctggccacggccggcgaggaccgtaccgtgcggctgtgggacatcaccgacccg
cgccggcccggcgccctcgccaccctgcgcgggcacggcgccgcggtgcgctgtgtggcg
ttcgccccggacgggcggacgctcgcgacgggcggcgacgacgacacgatccggctgtgg
gacctctccgcgccgcgccggccggagccggtcaggacgctgcgggggcacaccgacctc
gtgcactcggtggccttcagccccgacgggcacaccctggccagcggcagcgcggacgac
accatccggctgtgggacgtggccgaccccgcccgcgccgcggcggtcggctcgccgctg
accggccacaccggcccggtctggtcggtggcgttcagcccggacggcgtccggctcgcc
gccgcgagcgcggacagcacggcgagcctgtggaacgtcagcgacccgggctccccgtcc
caggtcggcgagccgctggcgggcagcagcggggagatgtacgccctggggttccgcccg
gacggccgtaccctcgccaccggcagcggggacggcaaggtgcgcctgtggtcggtcccg
acctcggacatgatcggccggagcggagcgttccgcccggacggccgggtgctggccacg
gccgcccgggacggcaggctgcggctgtggaacgtgacgcggcccggccggcccgtcctg
ctcggggagccgttcatgcgggccgacggcgacgagcgctccctgatgttctcccccgac
ggccgcacgctcgccgtcctcaccggcgtccggacggtccacctgtggaacgtcaccgat
cccgcccacccggtcgccgccggcccgccgctgcacctgcgcacccgcttcatgggctcc
gacgcgctcgcctacagcccggacggccgcaccctggccaccgcctacgacgaccgcacc
gtccagctgtgggacgtgaccgacccgggccgcccggccccgctcggcagccccctcacc
ggccaccggggctacatcaacagcctcgtcttcagcccggacggccacacgctggccagc
ggcagcgcggacagcacgatccggctgtggaacgtgaccgaccgcgcgcacgcccgcccg
ctgggcacgccgctcaccgaccactccggcccggtcaacgcgctcgccttcggtccggac
ggccacacgctggccagcggcagcgacgacgacacggtccgcctgtggaacaccgccgac
cccgcgcacgccgcacccctgggcaagccgctcaccggccacaccgaggcggtcacgtcc
ctgacgttcagcgcgggcggcgacaccctggccagcggcggcagcgacaacacggtccgc
ctgtggaacgtcgccgaccccgcctcggcgacccccatcggccagtcgatgagccccaac
gccaagacgggcaacttcctcatcttcagccccgagagccacgtcctgggcgtctccagc
ggcgccgacacggtccggctgtggagcctggacgccgacacggcgatccggcacatctgc
tcggtcacccgaggcgtcctgacaccccagcgctggcacgagtacctgccacgcctgggc
tacgaccccccgtgcggtcgatga
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