Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_5096
Help
Entry
SHJGH_5096 CDS
T02531
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sho03021
]
SHJGH_5096
Transcription machinery [BR:
sho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SHJGH_5096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_Crp_2
HTH_23
HTH_37
MarR_2
HTH_31
HTH_3
HTH_Tnp_4
MarR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AGF64759
LinkDB
All DBs
Position
complement(5799555..5800400)
Genome browser
AA seq
281 aa
AA seq
DB search
MVLTSTTATDTQTAELPEVADPSQVAPKDARELSRLFFEQLAVLEEGTHEYSYARNTLIE
MNMSLVRYAAGRFRSRGPEEMEDIVQVGMIGLIKAIDRFELSREAEFTSFAIPYIVGEIK
RFFRDTTWAVHVPRRLQEARVQLARATEELRSRLGRTPTDKELSELMSLSEDEVREARLA
ANGYNSASLDAAINGSEEGEAALQDFIGTEDAALELVEDFHALAPLIAELDERDRQIIHM
RFVEELTQAQIGERLGVSQMHVSRLLSRCLTRLREGMLSTR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcacgagcacgacggcaaccgacacgcagacggccgaactgcccgaagtcgcc
gatccctcccaggtggcccccaaggacgcccgggagctctcgcggctgttcttcgaacag
ctggcggtcctggaagagggcacccacgagtacagctatgcccgcaacacgctcatagag
atgaacatgtccctggtccgctacgcggccggccgcttccgcagccgtggaccggaggag
atggaggacatcgtccaggtcggcatgatcggcctgatcaaggcgatcgaccggttcgag
ctgtcgcgggaggcggagttcacctccttcgccattccctacatcgtcggcgagatcaag
cggttcttccgcgacaccacctgggccgtgcacgtgccgcgccgcctccaggaggcccgc
gtccagctcgcccgcgccaccgaggaactgcgcagccggctgggccgcacgccgaccgac
aaggaactgtcggagctgatgagcctgtccgaggacgaggtccgcgaggcccggctggcc
gccaacggctacaactccgcctccctggacgccgcgatcaacggcagcgaggagggcgaa
gcggccctccaggacttcatcggcaccgaggacgcggccctggagctggtggaggacttc
cacgccctggcccccctgatcgccgagctcgacgagagggaccggcagatcatccacatg
cgcttcgtcgaggaactcacccaggcccagatcggcgaacgcctcggtgtctcccagatg
cacgtctcccggctgctctcccgctgcctgacccgtctgcgcgagggaatgctcagcacc
cgctga
DBGET
integrated database retrieval system
