Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_5328
Help
Entry
SHJGH_5328 CDS
T02531
Name
(GenBank) Clp-family ATP-binding protease
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sho03110
]
SHJGH_5328
Chaperones and folding catalysts [BR:
sho03110
]
Heat shock proteins
HSP100
SHJGH_5328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
TniB
Sigma54_activat
UVR
ATPase_2
nSTAND3
bpMoxR
AAA_18
RsgA_GTPase
AAA_28
TsaE
AAA_24
IstB_IS21
NACHT
DUF99
NBD_SMAX1
AAA_19
DNA_pol3_delta2
DUF815
Motif
Other DBs
NCBI-ProteinID:
AGF64991
LinkDB
All DBs
Position
6045068..6047590
Genome browser
AA seq
840 aa
AA seq
DB search
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR
QQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA
AQVLVKLGADLNRVRQQVIQLLSGYQGKETAAAGGPAEGTPSTSLVLDQFGRNLTQAARE
SKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDA
ASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRD
RYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREF
DEKIAAVRRDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELI
AEVLATATGIPVFKLTEEESSRLLRMEEELHKRVIGQNDAVKALSKAIRRTRAGLKDPKR
PGGSFIFAGPSGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGY
EEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIM
TTNLGTRDISKGFNLGFAAAGDTKTNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLT
QEDILRIVDLMISKVDERLKDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIED
TLSEKILFGELRPGHIVVVDTEGEGDAATFTFRGEEKSALPDVPPIEQAAGGAGPNLSKE
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagaggttcaccgaccgcgcgcggcgggttgtcgtcctggctcaggaagaagcc
cggatgctcaaccacaactacatcggcaccgagcacatcctcctgggtctcatccacgag
ggcgaaggtgtcgccgctaaggccctggagagcctcggcatttcgcttgaggcggtccgc
cagcaggtggaggagatcatcggtcagggccagcaggccccgtccgggcacatccccttc
accccccgtgccaagaaggtcctggagctgtcgctccgcgaggcccttcagctgggccac
aactacatcggcacggaacacatcctgctcggcctgatccgcgagggcgagggcgtcgcc
gcccaggtcctggtcaagctgggcgcagacctcaaccgggtgcggcagcaggtcatccag
ctgctctccggctaccagggcaaggagaccgccgccgcgggcggcccggccgagggcacc
ccctcgacctctctcgtcctggaccagttcggccggaacctcacccaggccgctcgtgag
tccaagctcgacccggtcatcgggcgcgagaaggagatcgagcgggtcatgcaggtgctg
tcccgccgtaccaagaacaacccggtcctgatcggtgagcccggcgtcggcaagaccgcc
gtcgtcgagggcctcgcccaggccatcgtcaagggcgaggtgcccgagacgctcaaggac
aagcacctctacacgctggacctcggcgccctggtcgccggctcccgctaccgcggtgac
ttcgaggagcgcctcaagaaggtgctcaaggagatccgcacccgcggcgacatcatcctg
ttcatcgacgagctgcacacgctggtcggtgcgggtgccgccgagggcgccatcgacgcg
gcctcgatcctgaagccgatgctggcccgcggcgagctccagaccatcggtgcgacgacc
ctggacgagtaccgcaagcacctggagaaggacgcggccctggagcgccgcttccagccc
atccaggtcgccgagccgtccctgccgcacacgatcgagatcctcaagggcctgcgcgac
cgctacgaggcgcaccaccgcgtctccatcacggacgaggcgctggtccaggccgccacc
ctggccgaccggtacatctcggaccgcttcctgccggacaaggcgatcgacctgatcgac
gaggccggttcccggatgcgcatccgccggatgaccgctccgccggacctgcgcgagttc
gacgagaagatcgccgccgtccgccgggacaaggagtccgcgatcgactcgcaggacttc
gagaaggccgcgtccctgcgcgacaaggagaagcagctcctggccgccaaggcgaagcgg
gagaaggagtggaaggccggcgacatggacgtcgtcgccgaggtggacggcgagctgatc
gccgaggtcctcgccacggccaccggcatcccggtcttcaagctcacggaggaggagtcc
tcccgcctgctccgcatggaggaggagctccacaagcgggtcatcggccagaacgacgcc
gtcaaggcgctgtcgaaggcgatccgtcgtacgcgtgcgggtctgaaggacccgaagcgt
ccgggtggttcgttcatcttcgccggcccgtccggtgtcggtaagaccgagctgtccaag
gcgctcgccgagttcctcttcggtgacgaggacgcgctgatctccctcgacatgtcggag
ttcagcgagaagcacacggtgtcgcgtctcttcggttcgccccccggatacgtgggctac
gaggagggcggccagctgacggagaaggtgcgccgcaagccgttctcggtcgtcctcttc
gacgaggtcgagaaggcccacccggacatcttcaactcgctgctccagatcctggaggac
ggtcgcctgaccgactcccagggccgggtcgtggacttcaagaacacggtcatcatcatg
acgaccaacctcggcacccgggacatctccaagggcttcaacctcggcttcgccgccgcg
ggcgacacgaagaccaactacgagcgcatgaagaacaaggtgtcggacgagctcaagcag
cacttccggcccgagttcctcaaccgcgtcgacgacgtggtcgtcttcccgcagctgacg
caggaggacatcctgcggatcgtcgacctgatgatcagcaaggtggacgagcgcctgaag
gaccgggacatgggcatcgagctctcccagtccgcgaaggagctgctgtccaagaagggt
tacgacccggtgctgggcgcccggccgctgcgccgcacgatccagcgcgagatcgaggac
acgctctcggagaagatcctcttcggcgagctgcgccccggtcacatcgtggtcgtggac
accgagggcgagggcgacgccgccaccttcaccttccggggtgaggagaagtcggccctg
ccggacgtcccgccgatcgagcaggccgcgggtggggctgggcccaacctgagcaaggag
taa
DBGET
integrated database retrieval system
