Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_5340
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Entry
SHJGH_5340 CDS
T02531
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sho03400
]
SHJGH_5340
DNA repair and recombination proteins [BR:
sho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SHJGH_5340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
AAA_16
AAA
DUF7125
NACHT
AAA_14
ABC_tran
AAA_5
PAXNEB
nSTAND3
NTPase_1
DUF7129
RecA
AAA_29
Rad51
DAP3
AAA_24
AAA_30
RsgA_GTPase
TIP49
MCM
TniB
MMR_HSR1
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AGF65003
LinkDB
All DBs
Position
complement(6058936..6060345)
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AA seq
469 aa
AA seq
DB search
MAARTKTTKDRPSYRCTECGWQTAKWLGRCPECQAWGTVEEYGAPAVRTTAPGRVTSSAL
PIGQVDGRQATARSTGVPELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKAAGAEH
PTLYVTGEESASQVRLRADRIGALHDHLYLAAETDLSAVLGHLDEVKPSLLILDSVQTVA
SPEIEGAPGGMAQVREVAGALIRASKERGMSTLLVGHVTKDGAIAGPRLLEHLVDVVLHF
EGDRHARLRLVRGVKNRYGATDEVGCFELHDEGITGLADPSGLFLTRRAEPVPGTCLTVT
LEGRRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLEQRGRISALGKRDIYSAT
VGGVKLSEPAADLAIALALASAASDTPLPKNLVAIGEVGLAGEVRRVTGVQRRLAEAHRL
GFTHALVPADPGKVPPGMKVLEVADMGDALRVLPRSRRREAPREAEERR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgtaccaagacgacgaaggaccgcccgtcctaccgctgcaccgagtgcggc
tggcagacggccaagtggctcggccgctgcccggagtgccaggcctggggcacggtcgag
gagtacggcgcgcccgcggtccggaccaccgcaccgggccgggtgacctcctccgccctg
cccatcggccaggtcgacggccggcaggccaccgcccgctcgaccggcgtgccggagctg
gaccgggtgctcggcggcggcctcgtgccgggcgcggtcgtcctgctcgcgggcgagccc
ggcgtcggcaagtccaccctgctgctggacgtcgccgccaaggcggccggcgccgagcac
cccaccctctatgtgaccggcgaggagtcggcgagccaggtgcggctgcgcgccgaccgc
atcggcgccctccacgaccacctctacctggccgccgagaccgacctgtccgccgtcctc
ggccacctggacgaggtcaagccgtccctgctgatcctcgactcggtgcagacggtggcc
tccccggagatcgagggcgcgcccggcggcatggcccaggtccgcgaggtggcgggcgcg
ctgatccgggcgtccaaggagcggggcatgtccaccctgctcgtgggccacgtcacgaag
gacggcgccatcgccgggccccgcctgctggagcacctggtggacgtcgtcctgcacttc
gagggcgaccggcacgcgcgcctgcgcctggtccggggcgtgaagaaccgctacggggcg
acggacgaggtcggctgcttcgagttgcacgacgagggcatcacgggcctcgccgacccc
agcggcctgttcctgacccgccgggccgagccggtccccggcacctgcctgaccgtcacc
ctggagggccgccgtccgctggtggccgaggtgcaggcgctgaccgtcgactcccagatc
ccctccccgcgccgtacgacgtccggcctggagacctcgcgggtgtcgatgatgctggcc
gtcctggagcagcgcggccggatcagcgcgctgggcaagcgggacatctactcggcgacg
gtcggcggcgtgaagctgtcggagccggccgccgacctcgccatcgcgctcgccctggcc
tcggccgccagcgacaccccgctgccgaagaacctggtggcgatcggcgaggtggggctc
gcgggcgaggtcagacgggtcacgggcgtgcagcgcaggctcgccgaggcgcaccggctg
ggcttcacgcacgcgctcgtaccggccgatccggggaaggtgccgcccggcatgaaggtc
ctggaagtggccgacatgggcgacgcgctccgggtcctgccgcgctcccgtcgccgagag
gccccacgggaggcggaggagcgccggtag
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