Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_5435
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Entry
SHJGH_5435 CDS
T02531
Name
(GenBank) DNA polymerase related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHJGH_5435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sho03400
]
SHJGH_5435
Enzymes [BR:
sho01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SHJGH_5435
DNA repair and recombination proteins [BR:
sho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHJGH_5435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGF65098
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All DBs
Position
6178449..6179096
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AA seq
215 aa
AA seq
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MPTKAPEDRYDATPFVPEGAGLDVLRRAAADCRGCPLHRAATQTVFGAGNTDARVMLVGE
QPGDQEDRQGRPFVGPAGKLLDRALAQAGIDPSEAYVTNAVKHFKFTRAEPGKRRIHKAP
SLREMTACGPWLAAELALVEPELIVVLGATAGKALLGSSFRVSQVRGTVLEEEIHGRPER
LVPTVHPSAVLRADDREQAYQGLVADLEVAARALG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgaaggcacccgaagaccggtacgacgcgactcccttcgttcccgagggagcc
ggcctggacgttctccgccgagccgccgcggactgccgcggttgccccctgcaccgcgcc
gccacccagaccgtcttcggcgccgggaacaccgacgcccgcgtgatgctcgtgggggag
cagcccggcgatcaggaggaccggcagggcaggcccttcgtcgggcccgccggcaagctg
ctcgaccgggccctggcccaggccggcatcgacccctccgaggcctacgtcaccaacgcg
gtcaagcacttcaagttcacccgggccgagcccggcaagcgccgtatccacaaggcgccg
agcctgcgcgagatgacggcctgcggcccctggctcgcggccgagctggcgctggtggag
ccggagctgatcgtggtcctgggcgcgacggccggcaaggcgctgctggggtcgtcgttc
cgggtgagccaggtgcgcgggacggtgctggaggaggagatccacggccggccggagcgg
ctggtgccgaccgtgcatccgtcggccgtgctgcgcgcggacgaccgcgagcaggcgtac
cagggcctggtggccgatctggaagtggctgcacgcgcccttgggtaa
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