Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_5863
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Entry
SHJGH_5863 CDS
T02531
Name
(GenBank) Rhs protein
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T7SS_signal
RHS_repeat
TEN_YD-shell
DUF6531
RHS
TruB_C
WXG100
OCRE
TPR_11
T3SSipB
SRP68
YL1_C
TPR_14
Motif
Other DBs
NCBI-ProteinID:
AGF65526
LinkDB
All DBs
Position
complement(6642673..6647448)
Genome browser
AA seq
1591 aa
AA seq
DB search
MGFGDVTNALLGGAEDLYDKGKKKLGEGVDWATDKVGEGLDEVGAHKWADAVEDWGDGVA
SDLGATPGEQQLGQTEEANELVHGSPDKIRGSAKHLRDFHGAFDKVSQGLKKVDSSGWKG
EGGDTFREKFAVHPAKWAQAAEACQTAAGALESYADTVQWAQGQAKEAVELYKKGVKASK
DAVEAYNKKVDAYNAKIKAEEDPGPRPEPFHDPGKADIQAAREKLAEARKQRNTAASEAQ
GKVKAALAHAPAQPPPLNRLKDDFTDQALSTGIELTHFAGGVAKGTAGLVNFVRGLNPTD
PYNLTHPAAYLQNVSMTLSGLTSTVAHPERTAKAMWDEARKDPSEFGGRLLPQLVGTDGL
GMEAGLARKAAETGLTRRAAEAAATREARAGAEGAAGKTARERVNDDSHQPSRTGESVES
KGTDPIDLATGKMYLPQTDVALPGALPLLLTRRVESGYHLGRWFGPSWSSTLDQRLEIDA
EGVVYVTEDGLLLSYPHPAPGLPTLPSHGPRLPLDRVDDGYTITDPRTHRTWHFADQSPD
LAVLEQIDDRNGNWITFEYDTEGTPLGVHTSAGQGVRITTESGRVTAYHLTATGEELRRF
GYTDGNLTEVVNSSGLPLRFTYDEAGRVTSWTDTNDRGYTYEYDAQDRCVAEGGSAGHMA
LRLAYGDPDATTGLRTTTATTAEGHTRRYLVNDAWQVVAETDPLGATTRHVRDRYNRLLS
TTDPLGHTTTFEYDESGNLTRVVRPDGREARAEYNDLGLPVKAVNPDGTVLRQTYDDRGN
RTSVTDPAGQTTRFTYDEAGHLTSVTDPLGHTTTVVCDRAGLTVQVTDPLGATTRYERNA
LGLPTTITDPTGATTHLEWSLEGKLTRRTAPDGTTETWTYDGEGNCTSHTDPLGGVSRFE
YTHFDLLTARTGPDGVRYEFEHDTELRLTTVTNPQGLTWTYEYDAAGRLVTETDFDHRAL
EYVYDAAGRLVSRRNALGETVTFERNELGQVLRKNAAGQVTTYAYDLTDQLAQAVGPDGT
ALTLLRDRHGRLHSETVNGRTVTYTYDALGRRTGRTTSTGAVSTWSYDAAGRRTGMVASG
RPIDFAYDEAGRELTRHINGTVTLNHTFDVMGRLTSQSVTGAGGHRLQHRTYAYRADGNL
IGIDDHLSGTRRFDLDAAGRVTAVHAAGWTERYAYDEAGNQTEASWPSDHPGAEARGPRA
YTGTRITRAGNVRYEHDALGRITLRQKTRLSRKPGTWRYEWDAEDRLTSVVTPDGTRWRY
TYDPLGRRTAKLRVAEDGETVLERVDFTWDGTTLCEQTTTSVDLPHPVTLTWDHQGLRPL
AQTERITPADASQQEIDSRFFAIVTDLIGTPTELVDEQGDIAWHTRSTLWGTTAWAANST
TYTPLRFPGQYYDPETGLHYNYFRHYDPETARYLTPDPLGLAPAPNPTTYVHNPHAWTDA
LGLAPNGCPEEEHLFRGTTRGFNASDGTQSSGFTPTSTDPGVATAFARHSEQFGDAVVQL
IPRNALQGVETLPGYIRAEAEVGVNLPAHELARRATVELPANVAHEILGNMGIHVPRIKS
YEGITDALEWDIPKLSPDQIKQFVAEAYRHG
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atggggttcggcgatgtgaccaacgcgcttctgggcggtgccgaggacctctacgacaag
ggcaagaagaagctcggcgaaggtgtcgactgggccacggacaaggtcggcgagggcctg
gacgaggtcggcgcgcacaagtgggccgacgccgtggaggactggggcgacggtgtcgcc
tccgacctgggcgcgacgccgggtgagcagcagcttggccagaccgaggaggcgaacgag
ctcgtccacggcagccccgacaagatccggggcagcgccaagcacctgcgggacttccac
ggcgcgttcgacaaggtcagccagggcctgaagaaggtcgactcctccggctggaagggc
gagggcggcgacaccttccgggagaagttcgccgtgcaccccgccaagtgggcacaggcc
gccgaggcctgccagacggcggccggggcgctggagtcgtacgccgacaccgtccaatgg
gcacagggccaggcgaaggaggccgtcgagctctacaagaagggtgtcaaggcgtccaag
gacgcggtggaggcgtacaacaagaaggtcgacgcctacaacgccaagatcaaggccgag
gaagaccccggcccccgaccggagccgttccacgaccccggcaaggccgacatccaggcc
gcgcgtgagaagctcgccgaagcgcgcaagcaacgcaacaccgccgcatccgaggcccag
ggcaaggtcaaggccgccctggcccacgcccccgcccagcccccgcccctgaaccggctc
aaggacgacttcaccgaccaagcgctgtccaccggcatcgaactgacccacttcgccggc
ggcgtggccaagggcaccgccggcctggtcaacttcgtgcgcggcctgaaccccaccgac
ccctacaacctcacccaccccgccgcctacctgcagaacgtcagcatgacgctctccggc
ctgacctccaccgtcgcccaccccgaacgcaccgcgaaggccatgtgggacgaggcccgc
aaggacccctccgagttcggcggacgcctgctgccccagctcgtcggcacagacggcctc
ggcatggaagcgggcctggcccgcaaggccgccgagaccggcctcacccgacgcgccgcg
gaagcagcagccacacgggaagctcgcgccggagcggaaggcgcggccgggaagacagcc
cgggaacgcgtcaacgacgactcgcaccagccttcccgtaccggcgaatcggtggagagc
aagggcaccgacccgatcgacctcgccacgggcaagatgtacctgccccagacggacgtc
gccctccccggcgcactccccctgctcctgacccggcgcgtcgagtcgggctaccacctg
ggccgctggttcggcccctcctggtcctcaaccctggaccagcgcctggagatcgacgcg
gagggagtcgtctacgtcaccgaggacggcctcctgctgtcctacccccaccccgccccc
ggcctgcccaccctgcccagccacggcccccgcctccccctggaccgcgtggacgacggc
tacaccatcaccgacccccgcacccaccgcacctggcacttcgccgaccagagccccgac
ctcgcggtcctcgaacagatcgacgaccgcaacggcaactggatcaccttcgagtacgac
accgagggcaccccgctgggcgtccacaccagcgccggccagggcgtccgcatcacgacg
gagtcgggtcgcgtcacggcgtaccacctgaccgcgaccggcgaggaactgaggcgcttc
ggctacacggacggcaacctcacggaggtcgtcaactcctccggcctgccgctccgcttc
acctacgacgaggccggccgcgtcacctcctggacggacacgaacgaccgcggttacacg
tacgagtacgacgcccaggaccgctgcgtcgcggagggcggctcggcgggccacatggcg
ctgcgcctggcgtacggcgacccggacgcgacaacgggcctgaggacgacgacggcgacg
acggccgagggccacacacgccgctacttggtgaacgacgcctggcaggtggtggcggag
accgacccactgggcgcgacgacgcgacacgtccgcgaccgctacaaccgcctgctgtcc
acgacagacccgctgggccacacgacgacgttcgagtacgacgagtcgggcaacctcacg
cgggtggtccgcccggacggccgcgaggcgcgggcggagtacaacgacctcggcctgccg
gtgaaggccgtgaacccggacggcacggtgctccgtcagacgtacgacgaccggggcaac
cgcacgtcggtgacggacccggcgggccagacgacccgcttcacgtacgacgaggccggc
cacctcacgtcggtgacggacccgctgggccacaccacgacggtcgtctgcgaccgcgcg
ggcctcacggtacaggtgacggacccactgggcgcgaccacgcgctacgagcggaacgcc
ctcggcctccccaccacgatcaccgaccccaccggcgcgacgacccaccttgaatggtca
cttgaaggcaagctgacccgtcgcacggccccggacggcacgacggagacgtggacgtac
gacggcgagggcaactgcacgagccacacggacccgctgggcggggtcagccgcttcgag
tacacgcacttcgacctgctcacggcccgcacgggtccggacggcgtccgctacgaattc
gagcacgacacggaactgcgcctgacgacggtcacgaacccgcagggcctgacctggacg
tacgagtacgacgcggccggccgcctggtgacggagacggactttgaccaccgcgcactg
gagtacgtgtacgacgcggcgggccgcctggtgtcacggcggaacgcgctcggcgagacg
gtgaccttcgagcggaacgaactcggccaagtgctgcggaagaacgcggcaggccaggtc
acgacgtacgcctacgacctgaccgaccaactggcacaggcggtgggcccggacggcacg
gccctgaccctgctgcgggaccgccacggccgactgcactcggagacggtcaacggccgc
acggtgacgtacacctacgacgccttgggccgccgcacgggccgcaccacgtcgacaggt
gccgtatccacatggtcgtacgacgcggcgggccgccgcacgggcatggtggcgtcgggc
cggccgatcgacttcgcgtacgacgaggcgggccgcgaactgacccgccacatcaacggc
acggtcaccctgaatcacactttcgacgtcatgggccgcctcacgagtcagtcggtaacc
ggcgccgggggccaccggctccaacaccggacgtacgcctaccgcgccgacggcaacctg
atcggcatcgacgaccacctgtccggcacccgccgcttcgacctcgacgcggccggccgg
gtgacggcggtccacgcggccggctggacggagcgctacgcctacgacgaggcaggcaac
cagaccgaggcgtcctggccctcggatcacccgggcgcggaggcaaggggcccgcgcgcg
tacacgggcacccgcatcacccgagccggcaacgtccgctacgaacacgacgcgctcggc
cgcatcaccctccgccagaagacccgcctgtcccgcaaacccggcacctggcgctacgaa
tgggacgccgaggaccgcctgacatccgtggtcaccccggacggcacccgctggcgctac
acctacgaccccctgggccgccgcaccgccaaactccgcgtcgccgaggacggcgaaacg
gtcctggagcgggtggacttcacctgggacggcacaacgctctgcgaacagacgacgacc
tccgtcgacctcccccacccggtcaccctcacctgggaccaccagggcctgcgccccctc
gcccagacggaacgcatcaccccggccgacgcctcccagcaggagatcgactcccgcttc
ttcgccatcgtcaccgacctgatcggcaccccgaccgaactcgtcgacgaacaaggcgac
atcgcctggcacacccgcagcaccctatggggaacaacagcatgggcggcgaacagcacc
acctacacccccctgcgcttcccaggccagtactacgaccccgaaaccggcctccactac
aactacttccgccactacgacccggaaacggcccggtacctcactccggaccccttaggc
cttgcccctgctcccaaccccactacctacgtccacaatccacatgcatggaccgacgct
ctcggccttgctcctaacggctgcccggaagaggaacatctgttccgaggtaccaccagg
ggattcaacgcaagcgatggcacgcagagttccgggttcactccgacatctacagaccca
ggggtagccacagcattcgcaagacactcagaacaattcggggatgcagtcgttcaactt
atcccaagaaacgcactgcaaggagtcgagaccctacccggatacattcgcgccgaggcg
gaagtcggcgtgaatcttccggctcatgaacttgcccgcagagccacggtcgagcttcca
gcgaatgtcgctcatgaaattcttggaaatatgggaatccacgtccccaggattaagtca
tacgaaggcattaccgacgccctggaatgggacataccgaaactttccccagatcagata
aaacagttcgtagcagaggcttacaggcatggatga
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