Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_5909
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Entry
SHJGH_5909 CDS
T02531
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SHJGH_5909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sho03400
]
SHJGH_5909
Enzymes [BR:
sho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SHJGH_5909
DNA repair and recombination proteins [BR:
sho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SHJGH_5909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Spectrin_SYNE1
T2SSF
PipA
Motif
Other DBs
NCBI-ProteinID:
AGF65572
LinkDB
All DBs
Position
complement(6690670..6690900)
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AA seq
76 aa
AA seq
DB search
MTSKVDEALSYEQARDELIEVVRRLEAGGTSLEESLALWERGEELAKVCRRWLEGARARL
DAALAEEEGETEGDGG
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaaggtggacgaggcgctgtcgtacgagcaggcgcgtgacgagctgatcgag
gtcgtacggcggctggaggcgggcggtacgtcgctggaggagtccctggcgctgtgggag
cgcggcgaggagctggccaaggtgtgccggcgctggctggagggggcccgggcccggctg
gacgcggcgctggccgaggaggaaggggagacggagggggacggcgggtag
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