Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_6029
Help
Entry
SHJGH_6029 CDS
T02531
Name
(GenBank) ATP-dependent RNA helicase
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGF65692
LinkDB
All DBs
Position
complement(6824118..6827096)
Genome browser
AA seq
992 aa
AA seq
DB search
MPEWFVRTAADVPGTVRHDPRSLASHRAHRRGSTLTTTFRELGILPETAEALEAVGITTP
FPIQEMTLPVALSGTDVIGQAKTGTGKTLGFGLPLLERVTVPADVEAGRAAPEALTDAPQ
ALVVVPTRELCTQVTNDLLTAGKVRNVRVVAIYGGRAYEPQVEALKKGVDVVVGTPGRLL
DLAGQKKLDLKHVKCLVLDEADEMLDLGFLPDVEKIVNMLPAKRQTMLFSATMPGAVIGL
ARRYMSRPTHIRATAPDDEGATVANIKQFVYRAHNMDKPEMAARILQAEGRGLAMIFCRT
KRTAADIAEQLQRRGFASGAVHGDLGQGAREQALRAFRNGKVDVLVCTDVAARGIDVEGV
THVINYQSPEDEKTYLHRIGRTGRAGAKGTAITFVDWDDIPRWQLINKALELDFNDPVET
YSSSPHLFSDLGIPEGTKGTLPRSARTRAGLDAEELEDLGETGGRGGRGRGGRGGRAEPA
PAERERPARTPRRRRRTRGGTPLDASPAAPAAETSGTEEAPAATRTPRRRRRTRGGASAE
PVTAAATPTTAPEAAVETVTIAEDPAALDTPEKPRRRRTRRSAATETPVTESAVAPAQAE
PPVAEPVAAPVSADSPVAEPAAEAAPATETKPRRRTRKTAEAATPAETALDTAEATEAKP
RRTRKTAAAAPEAPEAEAKPRRTRKTAAAEPETAEATEAKPLRTRKTAAAAEAAVDTAEG
TETKPRRTHKAAEPVTTDAPEAEAEAKPRRTRKTAAAAEAAVDTAEATEAKPRRTRKATV
AEPETAEAEAKPRRTRKTAAAAPEATEPEAEAKPRRTRKTAAAAEAAADTAEGTEAKPRR
TRKATAAAVDTAEATEAKPRRTRKTAATAPEATEPEAEAKPRRTRKTAAAAPEAPEAEAK
PRRTRKTATAAVDAVDGEAVTAAKARRTRKAVAEAAVPEIPAQATEEPEAKPRRRTRKTA
ASAAEAAGESVETTPKPRRTRKATAAVEAPEA
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgagtggttcgtccgtacggcagccgacgtccccggcacggtcagacatgacccc
cgctcgctcgcctcgcaccgcgcacacagaagaggcagcaccctgactacgacgtttcga
gaactcggaatcctccccgagaccgccgaggccctggaggccgtcggcatcaccaccccc
ttccccatccaggagatgacactccccgtcgccctctccggcacggatgtcatcggccag
gccaagaccggcaccggcaagacgctgggcttcggtcttccgctcctggagcgcgtcacc
gtccccgccgacgtcgaggccggacgcgccgcccccgaggccctgacggacgccccgcag
gcgctcgtcgtcgtccccacgcgcgagctgtgcacccaggtcaccaacgacctgctgacg
gccggcaaggtccgtaacgtgcgcgtggtcgcgatctacggcggccgggcctacgagccc
caggtggaggccctgaagaagggcgtcgacgtggtcgtcggcaccccgggccgcctgctc
gacctcgcgggccagaagaagctcgacctgaagcacgtcaagtgcctggtcctcgacgag
gccgacgagatgctcgacctgggcttcctgcccgacgtcgagaagatcgtcaacatgctg
ccggccaagcgccagacgatgctgttctcggccacgatgccgggcgcggtcatcggcctc
gcccgccgctacatgtcccggcccacgcacatccgcgccaccgcgccggacgacgagggc
gccacggtcgcgaacatcaagcagttcgtctaccgcgcgcacaacatggacaagccggag
atggccgcccgcatcctccaggccgagggccgcgggctggcgatgatcttctgccgtacc
aagcgcacggccgccgacatcgccgagcagctccagcgccgcgggttcgcctccggcgcg
gtccacggcgacctcggccagggcgcccgcgagcaggccctgcgggccttccgcaacggc
aaggtcgacgtcctcgtctgcaccgacgtcgccgcgcgcggcatcgacgtcgagggcgtg
acccacgtcatcaactaccagtcccccgaggacgagaagacgtacctgcaccgcatcggc
cgcaccggccgcgcgggcgccaagggtacggcgatcacgttcgtcgactgggacgacatc
ccgcgctggcagctgatcaacaaggcgctggagctggacttcaacgacccggtggagacg
tattcgagctccccgcacctgttctccgacctcggcatccccgagggcaccaagggcacc
ctgccccgctccgcgcggacccgtgccgggctggacgcggaggagctggaggacctgggc
gagaccggcggacggggcggtcgcggccgtggtggccgcggtggccgtgccgagccggcc
ccggccgagcgtgagcgtccggctcgtacgccgcgccgccgtcgccgcacgcgcggtggc
accccgctggacgcctccccggccgcgccggccgcggagacctccggtaccgaggaggcg
ccggccgcgacccgcaccccgcgccgccgtcgccgtacgcgcggcggagcgtcggcggag
ccggtgacggccgccgccacgccgacgacggcccccgaggccgccgtcgagacggtgacc
atcgccgaggaccccgctgccctcgacaccccggagaagccgcgccgccgccgcacccgt
cggtcggccgcgaccgagaccccggtgaccgagtccgccgtggccccggctcaggccgag
cccccggtggccgagcccgtcgccgcacccgtgagcgcggacagcccggtggcggagccc
gccgccgaggccgccccggccaccgagaccaagccgcgccgccgcacccgcaagacggcc
gaggccgcgaccccggcggagacggcactggacacggcggaggccaccgaggcgaagccg
cgccgcacgcggaagaccgccgcagccgcgccggaggcccccgaggccgaggccaagccc
cgccggacccggaagaccgcggctgccgagccggagacggccgaggccaccgaggccaag
cccctccggacccggaagaccgcggctgccgctgaggccgccgtggacaccgccgagggc
acggaaaccaagccccgacgcacccacaaggcagcggagccggtcacgaccgacgcccct
gaggccgaggccgaggccaagccccgtcgcacccggaagaccgccgctgccgccgaggcc
gccgtggacaccgcggaagcgaccgaggccaagccgcgccggacccgtaaggccacggtc
gccgagcccgagacggccgaggccgaggccaagccgcgccggacccgcaagaccgcggct
gccgcacccgaggccaccgaaccggaggccgaggccaagccgcgccgcacccgcaagacc
gccgcagccgccgaggccgctgccgacacggccgagggcacggaagccaagccgcgccgt
acgcggaaggccaccgcagccgccgtggacaccgcggaagccaccgaggccaagccgcgc
cggacccgcaagaccgccgccacggcacccgaggccaccgaaccggaggccgaggccaag
ccgcggcgcacccgcaagaccgccgcagccgcgccggaagcccccgaggccgaggccaag
ccgcgccggacccgcaagacggccaccgcggccgtggacgcggtcgacggggaggcggtc
accgctgcgaaggcacgacggacccgtaaggccgttgccgaggcggctgttccggagatt
ccggcacaggccaccgaggagccggaggccaagccgcggcgccggacccgcaagaccgcg
gcgtccgctgccgaggcggccggtgagagcgtcgagacgacgcccaagccgcgccggacc
cgtaaggccacggcggccgtggaggctccggaggcctga
DBGET
integrated database retrieval system
