Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_6427
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Entry
SHJGH_6427 CDS
T02531
Name
(GenBank) histone-like DNA binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sho03032
]
SHJGH_6427
03036 Chromosome and associated proteins [BR:
sho03036
]
SHJGH_6427
03400 DNA repair and recombination proteins [BR:
sho03400
]
SHJGH_6427
DNA replication proteins [BR:
sho03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SHJGH_6427
Chromosome and associated proteins [BR:
sho03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SHJGH_6427
DNA repair and recombination proteins [BR:
sho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SHJGH_6427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Mitofilin
Motif
Other DBs
NCBI-ProteinID:
AGF66090
LinkDB
All DBs
Position
7277399..7278064
Genome browser
AA seq
221 aa
AA seq
DB search
MNKAQLVEAIADKLGGRQQAADAVDHVLDAIVRAVVGGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLSGPPPTIAKA
AGKKAAAKKTAGAAKKTAGTAARKTAAKKTTAAAKKTTAKKAPAKKTAATAKTTATKTAA
KKTTAKKAPAKKVTAKKAPAKKSTARKTTTAKKTTARKATS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaagttgggtggccgccagcaggcc
gccgacgctgtcgatcatgttctggacgccatcgtccgtgcggtcgtcgggggcgagcgg
gtctccgtcaccggcttcgggtccttcgagaaggtggaccgccccgcccgctacgcgcgc
aacccgcagacgggcgagcgggttcgggtcaagaagacctccgtgccgcgcttccgcgcc
ggtcagggcttcaaggacctggtgagcggttcgaagaagctcccgcgcgggggcgaggtg
gcggtcaagaaggcgccgaagggcagcctgtccggcccgccgcccaccatcgcgaaggcc
gccggcaagaaggccgccgccaagaagacggcgggcgcggcgaagaagaccgcgggcacc
gcggcgaggaagacggcggcgaagaagaccaccgccgccgcgaagaagaccacggcgaag
aaggctcccgccaagaagaccgcggcgaccgccaagaccaccgcgacgaagaccgccgcc
aagaagacgacggccaagaaggctccggcgaagaaggtcaccgccaagaaggccccggcg
aagaagtcgacggcccgcaagaccaccaccgccaagaagaccaccgcccgcaaggcgacg
tcgtaa
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