Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_8058
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Entry
SHJGH_8058 CDS
T02531
Name
(GenBank) ABC transporter binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SHJGH_8058
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sho02000
]
SHJGH_8058
Transporters [BR:
sho02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SHJGH_8058
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Phosphonate-bd
Ral
NPA
Motif
Other DBs
NCBI-ProteinID:
AGF67720
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Position
complement(9200269..9201468)
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AA seq
399 aa
AA seq
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MRLTRTLRASAVCAATLLLAAACDSSGSGGTSATGLNPPDLKAPTKLGRTEGQVNLIAWA
GYVEDGSNDPKADWVSGFEKQTGCQVHSKVAASSDEMVKLMKTGEYDAVSASGDASLRLI
ASGDAAPVNTDLVPHYKDIFSGLKNGAWNSVKGQMYGIPHGRGANLLMYNTAKVKPAPTS
WSAVFDDAARYKGHVTAYDSPIYIADAALYLKAARPELKIKDPYALDQKQFDAAVALLKQ
QNANVGEYWGDYLKEVSAFKSGDSVIGTTWQVIANLAASEGAKVKALVPKEGSTGWSDTW
MVSAKAKHPNCAYKWLDWIVSPKVNAQVAEYFGEAPANSKACAETSDKNFCTVYHAADEN
YWKKIAFWNTPIEQCLDGRKDVRCVPYAKWVQAWTEIKG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctcacccgtaccctgcgcgcctcggccgtgtgcgccgccacgctgctgctcgcc
gccgcctgcgactcctccggttccggcggtacctccgccaccggcctcaacccgcccgac
ctcaaggcccccacgaagctcggcaggaccgagggccaggtcaacctcatcgcctgggcc
ggctatgtggaggacggctccaacgaccccaaggcggactgggtctccggcttcgagaag
cagacggggtgccaggtccactcgaaggtggccgccagctcggacgagatggtcaagctg
atgaagaccggcgagtacgacgccgtctccgcctccggcgacgcctcgctgcgcctgatc
gcctccggtgacgcggcccccgtcaacaccgacctggtcccccactacaaggacatcttc
agcgggttgaagaacggtgcctggaactccgtcaaggggcagatgtacggcatcccgcac
ggccggggcgccaacctgctgatgtacaacaccgcgaaggtcaagcccgcgcccacctcc
tggtccgcggtcttcgacgacgccgcgcggtacaaggggcacgtcaccgcgtacgactcg
ccgatctacatcgccgacgccgccctgtacctcaaggccgccaggccggagttgaagatc
aaggacccgtacgcgctcgaccagaagcagttcgacgcggccgtggcgctgctgaaacag
cagaacgcgaacgtcggcgagtactggggcgactacttgaaggaggtctccgccttcaag
agcggggactcggtcatcggcacgacctggcaggtcatcgccaacctcgccgcctccgag
ggcgcgaaggtcaaggcgctggtcccgaaggagggttcgaccggctggtcggacacctgg
atggtctccgccaaggccaagcaccccaactgcgcctacaagtggctggactggatcgtc
tcccccaaggtcaacgcccaggtcgccgagtacttcggcgaggcccccgccaactccaag
gcgtgcgccgagaccagcgacaagaacttctgcacggtctaccacgccgccgacgagaac
tactggaagaagatcgccttctggaacacgcccatcgagcagtgcctcgacggccgcaag
gacgtccgttgcgtgccgtacgccaagtgggtgcaggcctggaccgagatcaagggctga
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