Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_p1006
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Entry
SHJGH_p1006 CDS
T02531
Name
(GenBank) Ku70/Ku80 protein
KO
K10979
DNA end-binding protein Ku
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SHJGH_p1006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sho03400
]
SHJGH_p1006
DNA repair and recombination proteins [BR:
sho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SHJGH_p1006
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
AGF68291
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All DBs
Position
pSHJGH1:complement(5080..6342)
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AA seq
420 aa
AA seq
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MRGRPTLGTLLFGSAGCGSRPTLFGRALAFRGRRPARVPRPDSGTDRDTPTPEGMHNAHS
GVPLASARTRSRTGGLVTGLSAYATRAGVVVRTDAGRRRRSYAGGARGEDGRWVMPRTIW
SGAISFGLVTVPINVVGATEDHSIHFHQYHVTDQGRVRYRKVCELEDREVPQDEIGKGYE
LTRTQVIPITDEDLSNLPLPTAKAIEIDAFVPLESVDPIRIADGYYLQPAGQVAAKPYKL
LVKALSRSSKVAVAKYAWSGRERLGLLRVRDDVLVLHAMRWPDEIRDPTELLPPPTEVSE
AEIESALALLDTMTVEELEGPEFQDRYTEAIAQLIEAKREDRPLPEAPEPEEPAAVLDLM
AALQESVSKAKASRGESAGPAEVHELPQPKKTAAKKQPAKKTAAKKSAAKKTAGRRPRSA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggggcggcccaccctcggcacgctcctgttcgggtcagccggctgcggtagccgt
cccaccctgttcgggcgcgcactggcgttccggggccggcgtccggcgagggtgccgcga
ccggattcggggaccgaccgcgacacccccaccccggagggcatgcacaacgcacacagc
ggggtgccccttgccagcgcacgcacacggagccgaacgggtggcctggtcacggggctg
tccgcgtacgccacgcgggccggggtggtggtgcggacggatgcgggtcgtcggcggcgt
tcctacgctggaggagctcggggtgaggacgggaggtgggtcatgccccgaacgatctgg
tccggcgcgatctccttcggcctggtcacggtgccgatcaatgtggtcggcgccactgaa
gaccacagcatccacttccaccagtaccacgtgaccgaccagggccgggtccgctaccgc
aaggtgtgcgagctggaggaccgcgaggtccctcaggacgagatcggcaagggatacgag
ctgactcggacgcaggtcatcccgatcaccgacgaggatctcagcaacctgcctctgccg
accgcgaaggcgatcgagatcgacgcgttcgtccccctggagtcggtcgacccgatccgg
atcgccgacggctactatctccagcccgccggtcaggtcgcggcaaagccgtacaagctc
ctggtcaaggccctgtcacggtcgtcgaaggtggccgtcgccaagtacgcctggtccggc
cgggaaagactcgggctgctgcgggtgcgcgacgacgtcctggtcctgcacgccatgcgc
tggcccgacgagatccgcgaccccaccgagctgctcccaccgccgaccgaggtgtccgag
gcggagatcgagagcgcgctcgcgctcttggacacgatgacggtggaggagctggagggc
cctgagttccaggaccgctacaccgaggccatcgcgcagctcatcgaggccaagcgcgag
gacaggccgctgccggaggcaccggagccggaggagccggcggcggtgctggacctgatg
gccgcattgcaggaatcggtgtcgaaggcgaaggcctcccggggcgagtccgccggcccg
gccgaggtgcacgagctgccgcagccgaagaagaccgccgcgaagaagcagccggccaag
aagaccgcggcgaagaagtcggccgcgaagaagacagccggccgccggccccgcagcgcc
tag
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