Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_p224
Help
Entry
SHJGH_p224 CDS
T02531
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho00270
Cysteine and methionine metabolism
sho01100
Metabolic pathways
Module
sho_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SHJGH_p224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sho03000
]
SHJGH_p224
03032 DNA replication proteins [BR:
sho03032
]
SHJGH_p224
03036 Chromosome and associated proteins [BR:
sho03036
]
SHJGH_p224
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sho02048
]
SHJGH_p224
Enzymes [BR:
sho01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SHJGH_p224
Transcription factors [BR:
sho03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SHJGH_p224
DNA replication proteins [BR:
sho03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SHJGH_p224
Chromosome and associated proteins [BR:
sho03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SHJGH_p224
Prokaryotic defense system [BR:
sho02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SHJGH_p224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
AlkZ-rel
Motif
Other DBs
NCBI-ProteinID:
AGF68493
LinkDB
All DBs
Position
pSHJGH2:complement(23164..24879)
Genome browser
AA seq
571 aa
AA seq
DB search
MMARTSSRKTRTATHRPAVRRRRFRHDESIAVDLFSGFGGLTKGIEDAGFTTIMAANHNA
YKVEVHEANHPDAEHWIADLVDPEASDYHSARDLPAADLLAAGVSCVNHSLANTIKAYEQ
GLTLFELEDPDYEARVTRSERDRATANCVLQYAAKHHPRLILVECTTQLTSWGPALPGRP
KVGDGSTYRWWLKQFDLLGYRHKVLYLNSQFFGVPQSRDRGYWVFVDKSLPMPDLEHRPV
SHCGRCDKDVEAVWTWKTGIPATGTVMYGKQYEYRCPSCRRPVVPPMTPSLAALDLSDLG
TRIGDKPVKTFRDGFVGPLARSSMARAERCRRRFADFPAILMPAKGVHGSERLLLQPMAT
QTSQQETAILSTGSVVQPLWGRDAADRPAMALAVDNFQGAARGAADPLPTQVGSETLAVL
SSGVIPYRKNTLPTLHSEAMPTFTSEQIPAVLTAAGWYKQHGPTGNETAPHPVTDPLGTL
TSRDTTALLMAQWQATLAELPLEDCFYRMMAAHEIGRGCGFDVDFNDYRGTFTVWGSARN
QVDGFGNAVSPQVGTWIGSRLRAVLHRAEAA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
gtgatggcccgaacgtccagcaggaagacccgcaccgccacccaccggccggccgtcagg
cgccgacgcttccgtcacgacgaatccatcgccgtcgacctcttcagcggcttcggcggg
ctcaccaagggcatcgaggacgccgggttcaccacgatcatggccgcgaaccacaacgcc
tacaaggtagaggtccacgaggcgaaccaccccgacgctgagcactggatcgccgacctc
gtcgacccggaggcctccgactaccactccgcccgcgatctccccgccgctgacctcctg
gcggcaggagtgagctgtgtcaaccactcactcgccaacacgatcaaggcgtatgagcag
ggcctgacactgttcgagctggaggaccccgactacgaggcacgcgtcaccaggtccgag
cgggaccgggccaccgccaactgcgtcctgcagtacgccgccaagcaccacccccggctg
atcctggtcgagtgcaccacccagctcacctcgtgggggcccgcgctgccgggccgcccg
aaggtcggggacggctcgacctaccggtggtggctcaagcagttcgacctgctcggctac
cggcacaaggtcctgtacctgaacagccagttcttcggagtcccccagtcccgggaccgc
ggctactgggtgttcgtcgacaagtccctgccgatgcccgacctggagcaccggccggtg
tcgcactgcgggcgctgcgacaaggacgtcgaggcggtgtggacgtggaagaccggcatc
ccggcgaccggcacggtgatgtacggcaagcagtacgaataccggtgcccgtcctgccgc
cggcccgtcgtcccgccgatgacgccgtcgctggccgcgctcgacctcagcgacctcggc
acgcgcatcggcgacaagccggtcaagacgttcagggacggcttcgtcgggccgctcgcg
cggtcgtcgatggcacgcgcggagcgctgccgccgccgcttcgccgacttcccggcgatc
ctcatgccggcgaagggtgtgcacggctcggagcggctcctgttgcagccgatggcgacg
cagaccagccagcaggagaccgcgatcctgtcgaccggatcggtcgtccagccgctgtgg
ggccgggacgccgctgacagaccggcgatggcactcgcggtcgacaacttccagggtgcc
gcgcgcggcgccgcggatccgctccccacccaggtcggatccgagaccctcgccgtgctg
tcctccggtgtcatcccgtaccggaagaacacgctgcccactctgcacagcgaggcgatg
cccaccttcacctcggagcagattccggcggtgctgacggccgccggctggtacaagcag
cacggtcccaccgggaacgagaccgcgcctcacccggtcacggacccgctcggcaccctc
acctcacgcgacacgaccgcgctgctcatggcccagtggcaggcgacgctcgccgagctg
ccgcttgaggactgcttctaccggatgatggcggcgcacgagatcggccgtggctgcggc
ttcgacgtcgacttcaacgactaccgcggcaccttcacggtctggggctccgcccgtaac
caggtcgacgggttcggcaacgccgtctccccgcaggtcggtacctggatcggctcccgg
ctgcgggccgtcctgcaccgggcggaggcggcatga
DBGET
integrated database retrieval system
