Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_p237
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Entry
SHJGH_p237 CDS
T02531
Name
(GenBank) putative TraA-like conjugal transfer protein
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
UvrD_C_2
BPL_C
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AGF68506
LinkDB
All DBs
Position
pSHJGH2:complement(34761..39830)
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AA seq
1689 aa
AA seq
DB search
MHHDPMAVVDLENRLLCVAMLSISAGSDPGYLTKTVSAGAEHYYLRSIELQGEPPGYWTG
DGIADLGLSGEVANDVFEDLYSDFIDPRKRDEMYARLAAIPHAEGSEEYAQAEKQIRKEC
RLGDAPRNYEKAFEKRLEKNLAAAEARAPGGVLSPEQVKAIEISTRKEAPSAKLYYDLTF
SAPKSWSVAHAALQVKAAEAREAGDLEAAEKFSRQADQLWDCWKAGVQAGLEHMQDEAGY
TRKGHHGAKVEGRSTGEYVKAGEFIVAAFAQHTSRQDDPQLHVHAAVLNKVRCVETDPVT
GREREVWRALDGTGLFRHKQAAGHLAERVAEQELERVLGWRVQMRPDGKAREIVGVDQDL
RDAFSSRRTAITAEVAEVAKAFEEKYGAAPSPYVLARISEDVSLKQRAAKKHDAVTREQL
LARWEESSKARLRESLADVPERIADESALHDLHRPAKEFDPEVIQRRAIAAVQEAKPTWT
RPDLLVELNRQLPDTLGGLDRHQVRELLNQLADDALSPTADNGVVRTKAPALVEIPEELQ
RADGTFKYEPNPDTFDRYATEEAIRTEGRLAEFAGKRGAPTVPSELVEEVIQRRGLKGKQ
ADFVRAAATSGRKVDLLVGPAGAGKSYTLAALTEVWESYEGRKVIGLASGQRAAEVLRDE
GVENVANIEMMLIANRSIAEGRPIANAEKYRIPAGALVIVDEAGMTDNADMDQVRALIEA
AGAKCVPAGDHHQLTAVGAGGIFAQWVEDAPGVHVLDEVRRFRDTDPVTGEKSVRQWEAD
ASLKLRQGDSEALAAYELHGRFRGGSAEEMTERAYQAWLTDHLAGRKPLLIAQDNAQVAE
LSARVRADLVRAGKVSEEGVVLRTGREEHGIETKAGVGDLIQLRRNNRHITAENGQFAVN
RTVAEVTGISDNGALMVKLEDGSQMHLPATYVKEYVELAYAATVHGAQGRTVGVCHSLVD
ESTTREALYVMLTRGEAANYGYVITHRDGDGIKQEEVPHHLAQLDAALQRTGLEPTATKT
IEAELERRENLAVLEPVWSGVKEQDAEKRFGTALLQAIGAEDYERAASSEAYGSLMRLAR
HVEEQGFDAEDLLVRTARSRELETADDVAKVLHDRLNKAYVFAEREQIRAEQAEQRAALA
EQERKVEAAVEAGQGPVDAEELQRAAEAAQQSDPHAELLRQTLASQTGVETLQASTDAEA
VERQEAELAAALRAAEEMTDAEVEQLVDAEPAEAEPEVHPHFEDLMRQTDAFQNVEVLHA
GQDQEVARRQAEEREARWEATDSYTARTPQLDGDLGRFLQEWAVEMDERTERLGQRIAVE
QPAWAIDRLGPVPEDPMERADWERRAGRVERYREAHGYDHETNAIGQAPPQGAVEARADW
ERARRALGVDEKEADIARASDETLRQVIERAEREEEWAPPYVADDMQKAFTAARDFRDQA
VQMELRAQEQAEKEAAEHEESVTEAMYEVQTATGYNEHQEALAQAMALQQVPTLQAEVDP
SDLVTETLDRAQTSRDIAETMADRAAKFQEIHQVREAWVEETQTVRDEADLARTELERRA
PAEPEVEASETPEAPASPAPSVYVPSVEEQLWEAMEQARIAQQILEQRAQERAQEAERQR
AAERQQPQAEELERERRDTGLGGYGADFERLGHELARAERDATPEPAAPAPAPEPPAPPM
PEIDLDVDM
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacgatccgatggctgttgttgatcttgaaaatcgcctactctgtgttgcgatg
ttgtcgatcagtgcaggctcagatcccggctacctgaccaagacggtcagtgccggtgcc
gagcattactacctgcgctcgatcgagctgcagggggagccgcccggctactggaccggc
gacggcatcgcggacctgggactgtcgggcgaggtcgccaacgacgtcttcgaggacctg
tacagcgacttcatcgacccccggaagcgggacgagatgtacgcccggctggccgcgatc
ccgcacgccgagggcagcgaggagtacgcccaggcggagaagcagatccgcaaggagtgc
cgtctcggcgacgccccgcgcaactacgagaaggctttcgagaagcggctggagaagaac
ctcgccgcggccgaggcccgcgccccgggcggggtgctcagccccgagcaggtcaaggcc
atcgagatcagcacccgcaaggaagcccccagcgcgaagctgtactacgacctcacgttc
tccgcgccgaaaagctggtcggtggcgcatgctgcgctgcaggtgaaggcagccgaggcg
cgcgaggccggcgacctggaggcggccgagaagttcagccgccaggccgaccagctgtgg
gactgctggaaggcgggcgtgcaggccggtctggagcacatgcaggacgaggccgggtac
acccgcaagggccaccacggggccaaggtcgagggccgttccaccggcgagtacgtcaag
gccggcgagttcatcgtggccgcgttcgcgcagcacacgagcaggcaggacgacccgcag
ctccacgtgcacgccgccgtgctgaacaaggtccggtgcgtggagaccgacccggtcacc
ggccgcgagcgcgaggtgtggcgggcgctggatggcacgggcctgttccggcacaagcag
gccgccgggcacctcgccgagcgggtggccgagcaggagctggagcgcgtgctgggctgg
cgggtgcagatgcgcccggacggcaaggcgcgcgagatcgtgggggtggaccaggacctg
cgggacgcgttcagcagccggcgcaccgccatcacggccgaggtcgccgaggtcgccaag
gcgttcgaggagaagtacggcgccgccccctccccgtacgtgctggcccggatcagcgag
gacgtcagcctcaagcagcgcgccgccaagaagcacgacgcggtgacgcgcgagcagctg
ctggcccgctgggaggagtccagcaaggcccggctgcgggagtcgctggccgacgtgccc
gagcggatcgccgacgagtccgctctgcatgacctgcaccgtccggccaaggagttcgac
cccgaggtcatccagcgccgcgccatcgccgccgtacaggaggcgaagccgacctggacg
cgccctgacctgctggtcgagctgaaccggcagctgcccgacaccctgggcgggctcgac
cgccaccaggtccgtgagctgctcaaccagctggccgacgacgccctctccccgactgcc
gacaatggcgtggtgcgcacgaaggcgcccgctctggtcgagatccccgaggagctgcag
cgcgccgacggcaccttcaagtacgagccgaaccccgacaccttcgaccggtacgccacc
gaggaggccatccgcaccgagggacgactggcggagttcgcgggcaagcgcggagcgccg
accgtccccagcgagctggtcgaggaggtcatccagcgccgcgggctcaagggcaagcag
gccgacttcgtccgggccgccgcaacctccggccgcaaggtcgacctgctggtcggcccg
gccggcgcgggcaagagctacacgctcgcggccctgaccgaggtctgggagtcctacgag
ggccgcaaggtcatcggtctggccagcggccagcgcgccgccgaggtgctgcgcgacgag
ggcgtggagaacgtcgccaacatcgaaatgatgttgattgccaaccggtcgatcgccgag
ggccgccccatcgccaacgccgagaagtaccgcatcccggcgggcgccctggtcatcgtc
gatgaggccggcatgaccgacaacgcggacatggaccaggtccgcgcgctcatcgaggcc
gcgggcgccaagtgcgtcccggccggtgaccaccaccagctcacggccgtgggcgcgggc
ggcatcttcgcccagtgggtcgaggacgccccgggcgtgcacgtcctggacgaggtccgc
cggttccgcgacaccgacccggtcaccggcgagaagagcgtgcgccagtgggaggccgac
gcctccctcaagctgcgccagggcgacagcgaggccctcgccgcgtacgagctgcacggc
cggttccgcggcggcagcgccgaggagatgacggagcgcgcctaccaggcatggctgacc
gaccacctcgcgggccgcaagccgctgctgattgcccaggacaacgcccaggtggccgag
ctgtccgcgcgcgtgcgggccgacctggtgcgtgccggcaaggtctccgaggagggcgtg
gtgctgcgcaccggccgggaggagcacggcatcgagaccaaggccggtgtcggtgacctg
atccagctgcgccgcaacaaccggcacatcacggcggagaacggccagttcgcggtgaac
cgcaccgtcgccgaggtcaccgggatcagcgacaacggggcgctgatggtgaagctggag
gacggctcccagatgcacctcccggcaacgtacgtgaaggagtacgtcgagctggcctac
gcggcgactgtccacggcgcccagggccgcacggtgggggtctgccactccctggtcgac
gagtcgaccacccgcgaggcgctgtacgtgatgctcacccgtggcgaggccgccaactac
ggctacgtcatcacccaccgggacggtgacggcatcaagcaggaggaggtcccccaccac
ctcgcccagctggacgccgcactgcagcgcaccggactggagccgaccgcgaccaagacg
atcgaggccgagctggagcgccgcgagaacctcgccgtgctggaaccggtctggtcgggc
gtgaaggagcaggacgccgagaagcgcttcggcaccgcgctgctgcaggccattggcgcc
gaggactacgagcgggccgcgagcagtgaggcgtacggctccctcatgcggctggcccgg
catgtcgaggagcagggcttcgacgccgaggacctgctggtgcgcaccgcccggtcccgc
gagctggagaccgccgacgacgtcgccaaggtgctgcacgaccggctcaacaaggcgtac
gtcttcgccgagcgcgagcagatccgtgccgagcaggccgagcagcgcgccgccctcgcc
gagcaggagcgcaaggtcgaggccgcagtcgaggccgggcaggggccggtcgacgcggag
gagttgcagcgtgcggccgaggccgcgcagcagagcgacccgcacgcggagctgctgcgg
cagaccctggcctcccagacgggcgtggagacgctgcaggccagcacggacgcggaggcc
gtcgagcgccaggaggcggagctggccgccgcgctgcgggccgccgaggagatgacggac
gccgaggtcgagcagctggtcgacgccgaaccggccgaggccgagcccgaggtgcacccg
cacttcgaggacctgatgcggcagaccgacgccttccagaacgtcgaggtgctgcacgcc
ggtcaggaccaggaggtcgcccggcgccaggccgaggagcgcgaggcccgctgggaggcg
acggattcctacaccgcgcgcaccccgcagctcgacggtgacctgggccgcttcctgcag
gagtgggcggtcgagatggacgagcgcaccgagcggctgggccagcgcatcgccgtggag
cagcctgcatgggccatcgaccggctgggcccggtgcccgaggatccgatggagcgggcc
gactgggagcgccgcgccggccgggtggagcggtaccgcgaggcccacggctacgaccac
gagaccaacgccatcgggcaggccccgccgcagggtgcggtcgaggcccgcgccgactgg
gagcgtgcgcgccgtgccctgggcgtggacgagaaggaagccgacatcgcccgtgcgtcc
gacgagacgctgcggcaggtgatcgagcgcgctgagcgcgaggaggagtgggcgccgccg
tacgtcgccgacgacatgcagaaggcgttcaccgcggcgcgcgacttccgggaccaggcc
gtgcagatggagctgcgcgctcaggagcaggcggagaaggaggccgccgagcacgaggag
agcgtcaccgaggccatgtacgaggtgcagaccgcgaccggctacaacgagcaccaggag
gccctcgcccaggcgatggccctgcagcaggtgcccacgctgcaggccgaggtcgacccg
agcgacctggtgacggagaccctcgaccgggcgcagacgagccgggacatcgccgagacg
atggccgaccgcgcggcgaagttccaggagatccaccaggtccgcgaggcgtgggtcgag
gagacccagaccgtgcgggacgaagcggacctcgcccgcaccgagctggagcgtcgcgcc
ccggcggagcccgaggtcgaggcatcggagaccccggaggcccccgcctccccggcgccg
tccgtgtacgtgccgtccgtggaggagcagctctgggaggcgatggagcaggcccgcatt
gcccagcagatcctggagcagcgcgctcaggagcgggcacaggaagccgagcggcagagg
gcggccgagcggcagcagccgcaggccgaggagctggagcgtgagcgccgcgacaccggc
ctgggcgggtacggggcggacttcgagcgactgggccacgagctggcacgagccgagcgc
gacgccactccggagcccgcagctccggcgcccgccccggagcccccggcgccgcccatg
ccggagatcgacctcgacgtcgacatgtag
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