Saccharothrix hoggarensis: ACRAKH_24535
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Entry
ACRAKH_24535 CDS
T11774
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
shog Saccharothrix hoggarensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
RNase_H_2
AAA_11
AAA_30
Viral_helicase1
AAA_19
UvrD_C_2
NAT10_TcmA_helicase
SLFN-g3_helicase
NPHP3_N
nSTAND3
AAA_22
IstB_IS21
PIF1
AAA_16
AAA_25
MeaB
NACHT
Motif
Other DBs
NCBI-ProteinID:
YAV65431
LinkDB
All DBs
Position
5459117..5462524
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AA seq
1135 aa
AA seq
DB search
MHSPADLVDLLECEHRSRLSLALARGVPGAPVPDPPRNAPAARHGHAHEQAVLARFRAEH
DVVEIPQPAPTHDALTHAAGLTAAAIASRAPVIYQAVFYADGFQGRADFLVATDRGYEPH
DAKLARHATPAAVVQLTAYADALGAQAGPAMHLLLGDGSTRTFQVADFLPLVRDLRQRLR
DRVAGPASLPARLWDDERPACATCRFGRHCATGRERDRDLSLVAGIRTDQRRKLAAAGLG
TIDALANATRADRPATMSAATFTGLRAQAALQVIQDDSRTEDDPTGKVAYEVVGPEALAA
LPAPSPGDLFFDMEGDPFALNGEGLEYLFGVVDAEERFTPFWAHTRPQEKAAFERFVDFA
TKALEDHPDAHVYHYAPYEVNALKKLAALHGTREDAVDHLLRSGALVDLYAVVRKALRVS
QRSYSIKYLEPLYMPSARAGDVTTAVSSIEAYEEFLALRTSDPARAEEVLAGIADYNTYD
CVSTLGLYRFLVEVRAEAGIEPHVPEPSFSEEVEDEIAAQRRAERAERLAAVVDPLLEGL
PDNPAEATDDERARALLAAAVGYHRRETNPAWWDFFRQVAAPLSELESDSACAVPVSVRA
QDWAMPSGRVRKAKRELRVWCDPDRPHPFASGEQVRLLYPGTPNRTRDAVVLAESAEDMV
LVESVAPDDVHGELPVAVLPGSPVRPTPKDEAVYELARSVVDGLPSLPPHPGVDLVRRTP
PRLRTGSLPRGGDVITNVIAAVDALDGSTLAVQGPPGAGKTYLAGRLIAHLIRGGRSVGV
TSNSHKAVENVLSAALAAGRELGVPIPTAKRAKGAPAKDCAWEQPRDNPALVRWRNDQGG
GHLVGGTAWTFANAALREQPFDVLIVDEAGQFALADALAVSTCARNLVLLGDPQQLPQVV
QGTHPAGAEASALGHLIGDADVIPPTLGYFLDQTRRMHPAVCEPVSNLSYAGLLHAHPSA
GLRGVAGVPPGVYLHSVAHSHNTTSSAEEAAAVVGVVRALMGRMWTDGSNARALDDSDIV
VVAPYNLQVRLVRRELEKHGYEHVRVGTVDRFQGQEAPVVITTMTSSAAVDLPRGLDFLL
SRNRLNVALSRAQAVAVVVCSPRLVEADIRDVDQLRLVSGMIGLMADARRWDVEA
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
gtgcactcccccgcggacctggtggacctgctggagtgcgagcaccgcagccgcctcagc
ctcgccctggcccgcggcgtgcccggcgcgcccgtgcccgacccgccgcggaacgcgccc
gccgcccgccacggccacgcgcacgagcaggccgtcctggcccgcttccgcgccgagcac
gacgtggtcgagatcccgcagcccgcgccgacccacgacgcgctcacgcacgccgccggg
ctgaccgcggcggccatcgcgtcccgcgcgccggtgatctaccaggctgtcttctacgcc
gacggcttccagggccgcgccgacttcctcgtcgccaccgaccgcggctacgagccgcac
gacgccaagctggcccggcacgccaccccggccgccgtcgtccagctcaccgcgtacgcc
gacgcgctcggcgcgcaggcgggccccgccatgcacctcctgctcggcgacggctccacc
cggacgttccaggtcgccgacttcctgccgctggtccgcgacctccggcagcggctccgc
gaccgggtcgccggccccgcgtccctgcccgcacggctgtgggacgacgagcggcccgcc
tgcgcgacgtgccggttcggccgccactgcgccaccggacgggaacgggaccgcgacctg
tccctggtcgccggcatccgcaccgaccagcggcgcaagctcgccgcggcgggtctcggc
acgatcgacgcgctggccaacgccacccgcgccgaccggcccgcgacgatgtccgccgcg
acgttcaccgggttgcgcgcccaggccgcgttgcaggtcatccaggacgactcgcgcacc
gaggacgacccgaccggcaaggtcgcctacgaggtggtcgggccggaggccctggccgcg
ctgcccgcgcccagccccggcgacctgttcttcgacatggagggcgacccgttcgcgctc
aacggcgagggcctggagtacctgttcggcgtggtcgacgccgaggagaggttcacgccg
ttctgggcgcacacccgtccgcaggagaaggcggcgttcgagcggttcgtcgacttcgcc
acgaaggcgttggaagatcacccggacgcgcacgtctaccactacgcgccgtacgaggtg
aacgcgctcaagaagctcgccgcgctgcacggcacgcgtgaggacgccgtcgaccacctc
ctgaggtccggcgcgctggtcgacctgtacgccgtggtgcgcaaggcgttgcgggtgtcc
cagcggtcgtactcgatcaagtacctggaaccgctgtacatgccgtccgcccgcgcgggc
gacgtgacgaccgcggtgtcgagcatcgaggcgtacgaggagttcctggcgctgcggacc
tccgacccggcgcgcgcggaggaggtgctcgccggcatcgccgactacaacacgtacgac
tgcgtgtcgacgctcggcctgtaccggttcctggtggaggtgcgcgcggaggcgggcatc
gagccgcacgtgccggagccgtcgttcagcgaggaggtcgaggacgagatcgcggcccag
cgccgggccgagcgggccgaacggctcgccgccgtcgtcgacccgctgctggagggcctg
cccgacaacccggccgaggccaccgacgacgagcgggcgcgggcgctgctggccgccgcc
gtcggctaccaccggcgcgagaccaacccggcgtggtgggacttcttccggcaggtggcg
gcgccgctgagcgagttggagtccgacagcgcgtgcgcggtgccggtgtcggtgcgggcg
caggactgggcgatgccgtccggccgggtccgcaaggccaagcgcgagctgcgggtgtgg
tgcgacccggaccggccgcacccgttcgcgtcgggcgagcaggtccggctgctctacccc
ggcacgccgaaccgcacccgtgacgcggtggtgctcgccgagtcggccgaggacatggtg
ctcgtggagagcgtcgcaccggacgacgtccacggggagctgcccgtcgccgtgctgccg
ggcagcccggtccggcccacgcccaaggacgaggccgtctacgagctggcgcggtcggtc
gtggacggcctgccgtcgctgccgccgcaccccggcgtcgacctggtccgccgcacgccg
ccgcgcctgaggaccggctcgctgccacgcggcggggacgtgatcaccaacgtcatcgcg
gcggtcgacgcgctggacggctcgacgttggccgtgcaggggccgcccggcgcgggcaag
acgtacctggcgggacggctgatcgcgcacctgatccgcggtgggcgcagcgtcggcgtg
acgtcgaacagccacaaggcggtggagaacgtgctgagcgcggccctggcggcgggccgt
gagctgggcgtgccgatcccgacggcgaagcgcgcgaagggcgcgcccgcgaaggactgc
gcgtgggagcagccgcgcgacaacccggcgctggtgcggtggcggaacgaccagggcggc
gggcacctcgtcggcggcacggcgtggacgttcgccaacgcggcgctgcgggagcagccg
ttcgacgtgctgatcgtggacgaggcggggcagttcgcgctggccgacgcgctggccgtg
tcgacgtgcgcgcggaacctcgtgctgctcggcgacccgcagcagttgccgcaggtcgtg
cagggcacccacccggcgggcgccgaggcgtccgcgctcgggcacctgatcggcgacgcc
gacgtcatcccgcccaccctgggctacttcctcgaccagacgcggcgcatgcacccggcc
gtgtgcgagcccgtgtcgaacctgtcgtacgcggggttgctgcacgcccaccccagcgcc
ggtctgcggggcgtcgcgggcgtgccgcccggcgtgtacctgcactcggtggcgcactcg
cacaacaccacgtcgtccgccgaggaggccgcggcggtggtcggcgtggtgcgcgcgctg
atgggtcgcatgtggacggacgggtcgaacgcgcgggcgctggacgactcggacatcgtc
gtcgtggcgccgtacaacctgcaggtgcggctggtgaggcgcgagttggagaagcacggc
tacgagcacgtgcgggtcggcacggtggaccggttccagggccaggaggcgccggtcgtc
atcaccaccatgacgtcgtccgcggccgtcgacctgccgcgcggcctggacttcctcctc
tcccggaaccggttgaacgtcgcgttgtcgcgggcgcaggccgtcgccgtggtcgtctgc
tcgccccggctggtggaggcggacatccgcgacgtcgaccagctgcgcctggtgtcgggc
atgatcgggttgatggcggacgccaggaggtgggacgtcgaagcctga
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