Segatella hominis: KUA50_002165
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Entry
KUA50_002165 CDS
T09571
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
shoi
Segatella hominis
Pathway
shoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUA50_002165 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shoi03019
]
KUA50_002165 (rny)
Messenger RNA biogenesis [BR:
shoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KUA50_002165 (rny)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
DUF4407
KH_NusA_2nd
KH_2
DUF4954
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WOZ81792
LinkDB
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Position
554429..555964
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AA seq
511 aa
AA seq
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MVEIIIAALVALILGGAAGFFIFRYVIKGKYNEMIEAANKEAEVVKEKKLLEVKEKFLNK
KAELEKEVQQRNSRIQQSENKLKQREISLNQRQEELGRRKQEVEQNQQRIDNEKKLLTVK
QQELEKMQKMEQAKLEELSGLSAEEAKQRLVESLKDQAKLDAASYINEIMDDAKLNANQQ
AKKIVIQTIQRVATETAIENSVSVFHIDNDEVKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVISAFDPIRREVCRLALHQLVADGRIHPARIEEVVAKVKKQLENEIIETGKRTAID
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
IGKVPDEESELPHALYGAKIAEKYKEKPDICNAIGAHHDEMEMNTLLAPIVQVCDAISGA
RPGARREIVEAYIKRLNDLEAIAMSYPGVTKTYAIQAGRELRVIVGADKMSDDESTKLSD
EIATKIQNEMTYPGQVKITVIREVRSVAYAK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaataattatcgccgctcttgtggctcttatcttaggtggagctgcagggttt
ttcattttccgttatgttattaagggaaaatataatgaaatgatagaagcagccaataaa
gaggctgaggtagttaaagagaaaaaacttcttgaggtaaaggaaaaattcctgaacaag
aaggctgagttggagaaggaagtgcaacagcgtaattcccgtatccagcagagtgaaaac
aagctcaagcagcgtgagatttctctcaatcagcgccaggaagaactgggtcgtcgcaaa
caggaagtggagcagaaccagcagcgtattgacaatgagaaaaaactcctcaccgtcaag
cagcaggaactcgagaagatgcagaagatggagcaggctaaactggaggaactctctggt
ttgagtgctgaggaagcgaaacagcgactggtggaaagtctgaaagatcaggctaaactg
gatgctgcaagttatatcaatgaaatcatggatgatgctaaactgaatgccaaccagcag
gctaagaagattgtaatccagaccatccaacgtgtggctacggaaactgctatagagaat
tccgttagtgtcttccatattgataatgatgaggtgaagggacgtattatcggtcgtgaa
ggtcgtaatatccgtgccttagaggcagctactggtgttgaaatcgttgttgatgatact
cctgaggctatcgttatttcagctttcgatccgatccgtcgtgaagtttgtcgcttggct
ctccaccagttggttgctgatggacgtattcatcctgctcgtattgaggaagttgtggct
aaggtgaagaagcagttggagaatgagattatcgaaacgggtaagcgtactgctattgac
ctgggtattcatggtttacatccagagttgattcgtattatcggtaagatgaaatatcgt
tcttcatacggacagaacctcttacagcatgctcgtgagacagccaatctctgtgctgta
atggcttctgagttgggattgaatcctaagaaggctaagcgtgctggtctcttacatgat
attggtaaggtgcctgatgaggagagtgaattgccacacgcattgtatggtgctaagatt
gctgaaaagtataaggagaaaccagatatctgcaatgccatcggtgctcaccatgatgaa
atggagatgaatacgctcttggctcctattgttcaggtctgtgatgccatctctggtgcc
cgtcctggtgcccgtcgtgagattgttgaggcttatatcaagcgtctgaatgaccttgaa
gctatcgcaatgagctacccaggtgtaaccaagacttatgctattcaggctggtcgtgaa
cttcgtgtgattgtgggtgcagacaagatgtctgatgatgagagtacaaaactttctgat
gagattgcaaccaagattcagaatgagatgacatatcctggtcaggtgaagattactgtc
atccgcgaggttcgtagcgttgcttatgctaaataa
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