Segatella hominis: KUA50_004195
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Entry
KUA50_004195 CDS
T09571
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
shoi
Segatella hominis
Brite
KEGG Orthology (KO) [BR:
shoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shoi03019
]
KUA50_004195 (hrpB)
Enzymes [BR:
shoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KUA50_004195 (hrpB)
Messenger RNA biogenesis [BR:
shoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KUA50_004195 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
CON_HrpB
AAA_19
ResIII
Flavi_DEAD
HA2_N
nSTAND3
AAA_22
AAA_30
UvrD-helicase
AAA_16
Helicase_RecD
ABC_tran
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WOZ82174
LinkDB
All DBs
Position
complement(1056172..1058715)
Genome browser
AA seq
847 aa
AA seq
DB search
MSIENIAKRSGNLPVFQIADAVNQTLSEHNSIVITAAPGSGKSTVLPLTMLQALGSEGKI
IILEPRRIAARQIAERMAYLLGEPIGKTVGYRIRFETKASKDTRIEVVTEGILTRMLIED
ATLDGVNLVVFDEFHERSLAADLAFALTHQTQQIIRDDLKIVIMSATIDVDSICHSLQAP
MIESQGKMFPVEIVYAKETPQLHEIVQVTAATILKAYREQEGDMLIFLPGQGEIIKCAEL
LEKSSLDAKVYPLYGNLSQEAQKQAIAPSLDGERKIVLATPIAETSITIEGVKIVIDAGY
CRRLNYDAKTGLSRLDTVRISKDMAVQRAGRAGRVTEGTCYRLWTMATEHQMEEQRKPEI
LEADLSSMLLEIAAFGETNVAVLPWLTPPPTGNLLSAKELLVMLGAIVLHNSQPKNVSNS
KEEEASFSLTPLGKVMVKLPCHPRIAKMISGAKTQQEKSLACDVAALLEEKDPLSDQEDK
DITLRISLLRNARRKQSLGRWAKIAKSSAELHRMCKVKVENQDPSAEVVGRLVALAYPER
IALAMDHIGNYRLANGNRVRIESTDSLIGYQWLAVASMHSNGNAGKVFLAAPVCEKDLQE
LATEHDHVSWDSKQGCVVMQREKRIGRIIVDSKPIHDIDKSLIINIICEAIRKDGLSMSD
WNEQVQMLQRRVAQVTEWHPELEIPNLSTPYLMEHAQDWLPFYLEEGNHVISTNSELKKI
NLKEVLWNSIPYDLQQEIDRLAPTHIQVPSGSRIKLDYRQGTEIPVLSVRLQECFGMKET
PCVNDGKQPVLMELLSPGFKPVQLTQDLGSFWKDTYFEVRKELKRRYPKHFWPENPLESE
AVKGVKR
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattgaaaatatagccaaacgttccggtaatcttccggtttttcaaatcgctgat
gcagtaaaccaaactttgtcagagcacaattccattgtgattacggctgcacccggttct
ggaaaatcaaccgttctcccgcttaccatgcttcaagcattgggaagcgaggggaaaata
atcattctcgaacccaggagaattgcagccagacaaatcgctgagcgcatggcttatttg
ctcggtgaaccgataggaaaaactgtgggctatcgtattcgctttgaaaccaaagcttct
aaagatacacgcattgaagtcgtgacggaaggaattcttaccagaatgctgatagaagat
gctacactcgacggggtgaatcttgttgtctttgatgaatttcatgaaagaagtcttgcg
gctgatctggcttttgccctcacccatcagacccaacagattatcagagacgacctgaaa
atcgtcatcatgtcggctaccattgatgtggactctatctgccattcccttcaggctccc
atgatagagagtcagggaaaaatgtttccagtagaaatcgtttatgcaaaggaaactccg
caacttcatgagattgtgcaggttaccgctgccactatcctgaaagcctatagggaacag
gaaggagacatgcttatatttctgcctggacagggagagattataaaatgcgcggaattg
ctcgagaaatcttcacttgatgcaaaggtttatcctctttacggcaacttatctcaagaa
gcacaaaaacaggccatcgctccttccctggatggagaaaggaagattgtgctcgcaact
cctattgctgaaacttctattactattgagggggtaaaaattgtgatagatgcgggctat
tgccgtcgtttgaactatgatgcgaaaactggattgagtcgtcttgatacagtaagaatc
agcaaggacatggctgtacagagagcgggacgtgcaggacgagtgacagaaggaacctgc
tatcgactttggacaatggcgacggaacatcagatggaggaacaacgtaaaccggaaatt
ctggaagctgacttgtcatccatgttgcttgaaatcgcagcattcggcgaaacaaatgtt
gcagtcttgccttggcttactccacctccgactggtaatttactgagtgcaaaggaatta
ttagtaatgcttggagcgattgttctgcataattcccagccaaagaatgtttctaatagc
aaggaggaagaagcttctttcagcctgactcctttgggcaaagtaatggtcaaactccct
tgtcatcctcgtattgctaaaatgatttcgggagcgaaaacgcagcaggagaagagtctg
gcatgtgatgtggctgctctcttggaagaaaaagatccgctttctgatcaggaggataag
gatattactcttcgcatttcccttttgcggaatgcacgcagaaaacagagtttgggcaga
tgggcaaaaatcgcaaagagttcggcagaactgcatcgtatgtgcaaggttaaagtggag
aatcaggatccttctgctgaagttgtcggccgtctggtggctttagcttatccggaacgc
atcgccctcgccatggatcatattggcaactatcgtttggcgaatggtaatagagtcaga
atagaaagcacagattccctaattggttaccaatggcttgcggtggcttcgatgcattcc
aatggaaatgcaggaaaggttttcttagcagcacctgtctgcgaaaaggatttacaggaa
ctcgccacagagcatgatcatgtttcttgggacagtaaacagggatgtgttgtcatgcaa
agggaaaaaagaattggtagaatcattgttgacagcaaaccgattcatgatattgataaa
agtctgattatcaacattatatgtgaagctatcagaaaagatggacttagcatgtccgac
tggaatgaacaggtgcagatgctgcagaggcgtgtggctcaagtgacagaatggcatcct
gaactggagattccgaatctgagtactccttatctgatggaacatgcgcaagactggctt
ccgttctatctggaagaaggaaatcatgtgatttccactaatagtgaactgaagaaaatc
aatctgaaagaagttttgtggaatagcattccttatgatcttcaacaggaaatcgatcgg
ctggctcctacccatatccaagttccttctggtagcagaatcaaactcgattaccgccag
ggtactgaaattcctgtattgagcgtacgcttgcaggagtgctttggaatgaaggaaaca
ccttgtgtgaatgacggaaaacagcctgtactgatggaacttctgtcgcctggtttcaag
ccggtgcaattgactcaggatttgggcagtttctggaaggacacatattttgaagtacga
aaggaattgaagcgccgctatcctaagcatttctggcctgagaatccgttggaaagcgaa
gctgttaaaggagtgaagagatag
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