Segatella hominis: KUA50_005095
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Entry
KUA50_005095 CDS
T09571
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
shoi
Segatella hominis
Pathway
shoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUA50_005095 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shoi03019
]
KUA50_005095 (recQ)
03400 DNA repair and recombination proteins [BR:
shoi03400
]
KUA50_005095 (recQ)
Enzymes [BR:
shoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KUA50_005095 (recQ)
Messenger RNA biogenesis [BR:
shoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KUA50_005095 (recQ)
DNA repair and recombination proteins [BR:
shoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KUA50_005095 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Cas3-like_C_2
zf-CXXC
ABC_N
Motif
Other DBs
NCBI-ProteinID:
WOZ82339
LinkDB
All DBs
Position
1261278..1263083
Genome browser
AA seq
601 aa
AA seq
DB search
MQIIDILKNYFGYDSFRSNQEAIIQEIMQGKDCLVLMPTGGGKSLCYQIPALALPGTAVV
ISPLISLMHDQVEALKANGIPAEALNSSTDTIEETIIRRRCEAGDLKIIYVSPEKLLSEI
PYLFSNIKISLFAVDEAHCISQWGHDFRPEYSQLGLLHERFQGVPVMALTATADKITRED
IVKQLHLNGKTFVSSFDRPNLSLAVRREGTKAEKIKFILRHIGSHPGDAGIIYCLSRKNT
EVVAEELKKKGINAAAYHAGLPTEERASIQQRFKMDQIQVVCATIAFGMGIDKGNVRWVI
HYNLPQSIESFYQEIGRAGRDGAPADTILFYSLADVIQRKSFAEASGQKAINAEKLQRMQ
EYAEARVCRRRILLNYFGETSAEDCGHCDVCAHPPKTFDGTIVTQKALSAIVRTNEKIHI
GQCIEVLRGIKSPTVVKNHYNELKTFGVGSDVSVKDWQNYMLQMMQMGFFEIAYNEHNVM
KVTGLGWQVLKGEHPVQLAVTQQNDKSKTPVVHPRLVRVSHTKTENQDLFERLRKLRLKL
ATEQGYPPYIILSDQSLHELAAMKPRTIEQFGLVHGIGEFKKKKYGEIFLKEINKEPRMF
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataatagatatactgaaaaattattttggatatgattccttccgttctaatcag
gaagccatcatccaggaaatcatgcagggcaaggattgtctcgtactgatgcctacagga
ggcggtaaaagtctctgctatcagatacccgccttagccttgcctggtaccgctgtggtt
atatcaccactcatcagtctgatgcacgatcaggtggaagcgctcaaagccaatggtatt
ccggcagaagcactcaacagtagtacggatacgatagaggaaaccatcatcagaagaaga
tgtgaggctggtgacctgaaaatcatatacgtttctccagagaaattgctgagcgaaata
ccatatctcttcagcaatatcaaaatctcattatttgccgtagatgaggctcactgtatc
agccaatgggggcatgatttcagaccggaatattcacagttgggacttcttcacgaaaga
ttccaaggagtaccggtcatggctctgaccgccactgctgataaaatcacccgtgaggac
atcgtcaagcagctacacctcaatggcaagacattcgtcagcagcttcgaccgccccaac
ttaagtctggctgtacgccgtgaaggaaccaaggcagaaaaaatcaaattcatcttgcgc
catatcggttcccatccgggcgatgcaggtatcatctattgtctctcgagaaagaataca
gaggttgtggcagaagaactcaaaaagaaaggcatcaatgctgccgcctatcatgccggg
cttcctacagaagaacgagcttctatccagcaacggttcaagatggatcagatacaggta
gtctgcgccaccattgccttcggcatgggtatcgacaagggaaacgtaagatgggtcatc
cactataacctgccacagagcatcgaaagtttctatcaggagataggaagagccgggcgc
gacggggcacctgcagacaccatcctattctactcattagctgatgtcatacagagaaag
agttttgctgaagcaagcgggcaaaaggctatcaatgctgagaaactgcaacgtatgcag
gaatatgctgaagccagagtctgccgcagaagaatcctgctcaactactttggtgaaaca
tcagcggaagactgcgggcactgcgatgtatgcgcccatccgccaaaaacattcgatggt
acgattgtcacacaaaaagcactgagcgccattgtcagaactaacgaaaaaattcacatc
ggacaatgtatcgaagttctcaggggcatcaaatcacctacagtggtcaaaaaccattac
aatgaactcaagacctttggcgtgggaagtgacgtcagcgtgaaagactggcaaaactac
atgttgcagatgatgcagatgggatttttcgaaattgcctacaatgagcacaatgtcatg
aaagtaacgggcctcggctggcaggtactcaagggagaacaccctgtacaactggctgtc
acacaacaaaacgataagagcaagactccagtggtacatccaagactggtgcgcgtatca
catactaagactgagaatcaggaccttttcgaaagattgagaaaactccgactcaaactg
gctacagaacagggctatccgccttacatcatactgtcagaccagtctttgcatgaattg
gcagccatgaaaccaagaaccatcgaacagtttggcttagtgcatggcatcggtgaattc
aagaagaaaaagtatggggaaatcttcctcaaagaaatcaataaagaaccaagaatgttt
gaataa
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