Segatella hominis: KUA50_006555
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Entry
KUA50_006555 CDS
T09571
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
shoi
Segatella hominis
Pathway
shoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUA50_006555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shoi03019
]
KUA50_006555
03400 DNA repair and recombination proteins [BR:
shoi03400
]
KUA50_006555
Enzymes [BR:
shoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KUA50_006555
Messenger RNA biogenesis [BR:
shoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KUA50_006555
DNA repair and recombination proteins [BR:
shoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KUA50_006555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Thioredoxin_4
MCM4_WHD
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
WOZ82593
LinkDB
All DBs
Position
1575561..1577462
Genome browser
AA seq
633 aa
AA seq
DB search
MTDKFQEILRTYWGYPDFRGIQRDIIESISQGKDTLGLMPTGGGKSITFQVPALAQDGVC
IVITPLIALMKDQVSHLKERGILADAIYADRSRSEIIQTLENCIFGGVKILYVSPERLST
DIFQTKLRHIKVSFITVDEAHCISQWGYDFRPSYLKISDIRKLKPGTPILALTATATPEV
VDDIQNQLQFSEKNVFKMSFERKNLAYIVRITTDKHGEMVHILKCVQGSAIIYVRSRRRT
KEIAEILNKNGIPATFYHAGLDPAVKDERQREWQEDQIRVMVATNAFGMGIDKPDVRMVI
HIDCPDSLEAYFQEAGRAGRDGNKSYAVLLYDASDERKLTKRINDTFPEKELIRDIYEHL
AYFFQIGVGSGCGKTFEFNIEKFSYIYKYYPTKVDAALRILEQCGYIHYEDNPDGKARLM
FNLNRSDLYLLDNLSENEDQVVTSLLRVYGGLFTDFVYIDESLIAQQAELSIQQVYFALK
CLATKHIITFVPRRKIPYITYTRDRIDGDKVVITQEAYENRKEQFVKRINSMIAYAQTDF
ICRSRQLLRYFGEETKEDCKQCDVCLEHKDNDSVAKQMFEKAKESILQILGDQKKHHITE
LREIQVPSQQLENALEMLVSENQIHIDGSYIYL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacagataaatttcaagagatattgcgaacatactgggggtatcctgacttccgtggc
atacagagagacattatcgaaagtatatcacagggtaaggataccctcggtcttatgcct
actggtggtggaaaatccatcacttttcaggttcctgcactcgcccaggatggcgtttgc
atcgtgattacgcccctcatagccctcatgaaagaccaggttagccacctcaaggaacgc
ggtatcctggcagatgctatctatgccgacagatccagaagtgaaatcatacagacactt
gagaattgtatctttggcggagtcaagattctgtatgtctctccagaaagactttctacg
gatattttccagaccaaattacgccacatcaaagtaagctttatcacagtggatgaagcc
cactgcatcagtcagtggggatatgatttccgtccttcttatctgaagatttcagatatc
agaaagctgaaaccgggaacacctatcctggcacttactgccacggctaccccagaagtc
gtagatgatatccagaaccaactccagttttcagaaaagaatgtgttcaaaatgagtttt
gaacgcaaaaacctggcatatattgtacgcattacgaccgacaagcatggcgaaatggtt
catatcctgaaatgtgtacagggttctgccatcatctatgttagaagccgccgccgtacg
aaggaaatagcagaaatcctcaataagaacggcatccctgccactttctatcatgcagga
cttgaccctgccgtaaaggatgaacgacagagagagtggcaggaagatcagataagagtg
atggttgctaccaatgccttcggtatgggtatcgacaaacccgatgtgagaatggtcatc
catatagattgcccagactctctggaagcttatttccaggaggctggtcgtgcgggtaga
gatggcaacaaatcatacgcagtactactctatgatgccagcgacgaacgcaaactgacc
aaacgcatcaacgatacctttcctgagaaagaactaatcagggatatctacgaacacctc
gcctatttcttccaaataggtgtggggagcggttgcggaaaaactttcgaattcaacata
gagaaattcagctatatctataagtattaccctacaaaagtagatgctgctttgagaata
ctggaacagtgtggttacattcattacgaagacaatcccgacgggaaagcccgcctcatg
ttcaacctgaacagaagcgacctttatctactggataatctgtcagaaaatgaagaccag
gttgtcacgtccctcctacgcgtttacggaggactcttcacagacttcgtatatatcgac
gaatctctgatagcccaacaggcagaattgagtatccagcaggtatatttcgcattgaaa
tgccttgccaccaaacatatcatcactttcgttcctcgtagaaaaatcccgtatatcacc
tatacccgggatagaattgatggagataaggtcgtcatcacccaagaagcatacgaaaac
agaaaagaacaattcgtaaaacgtatcaacagtatgatagcatatgcacaaacagacttt
atctgccgttcacgacaactcttacgctatttcggagaagaaaccaaggaggattgcaag
caatgcgatgtctgtctggaacacaaagacaacgattctgtagccaaacagatgtttgaa
aaggcaaaagaaagtattctccagatattaggtgatcaaaagaaacaccacattacagaa
ttaagagagatacaagtaccgagccagcagttagaaaatgctttagaaatgctggtatca
gaaaaccagatacatatagacggcagttatatctatctgtaa
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