Segatella hominis: KUA50_006850
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Entry
KUA50_006850 CDS
T09571
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
shoi
Segatella hominis
Pathway
shoi00300
Lysine biosynthesis
shoi00470
D-Amino acid metabolism
shoi01100
Metabolic pathways
shoi01110
Biosynthesis of secondary metabolites
shoi01120
Microbial metabolism in diverse environments
shoi01230
Biosynthesis of amino acids
Module
shoi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shoi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KUA50_006850 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KUA50_006850 (dapF)
Enzymes [BR:
shoi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KUA50_006850 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
WOZ82644
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Position
1651958..1652800
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AA seq
280 aa
AA seq
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MKETVHFTKMHGAGNDYIYVDTQLYDIPDPEKAAIAWSAYHTGIGSDGLVLIGKPKDSRR
ADYSMRIFNADGSEAMMCGNASRCIGKYLYEKGLTRKDTIRLETLSGIKILKLHIQDNHQ
IVDSVTVDMLKPKLENPEQFIGPSVLAADERIFEGTYVCMGNPHFVTFVDDIDTIDIAHY
GKILERDQAFPQRCNIEFAQLTDTDIIRTRVWERGSGITMACGTGACATAVAAFLTKRAG
RKSSIVMDGGTLQIEYNEEDEHVYMTGPAAFVFEGEIQVE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacagttcatttcacaaagatgcatggagctggaaatgattacatttatgta
gatacccagttgtacgacatccccgacccagaaaaggcagctatagcctggagtgcttat
cacacaggtattggaagcgatggactggttcttatcggcaaaccaaaggatagcagaaga
gcagactactccatgcgcatcttcaatgctgatggctctgaagccatgatgtgtggtaat
gcaagtcgctgtatcggaaaatatctttatgaaaaaggattgacccgaaaagacaccata
cggcttgaaacactatcaggcatcaagatattgaaattgcatattcaggataatcatcaa
attgtagattcggtaacagtagatatgctgaaacccaaattggaaaatcctgagcaattc
ataggtccttctgtacttgctgcagacgaaagaatctttgaaggcacttacgtttgtatg
ggaaatccacatttcgtaactttcgtggatgacatcgatactatcgacatcgcccactat
ggaaaaatcctcgaaagagaccaagcctttcctcaacgctgtaacatcgaatttgcacaa
ttgacagatacagacatcattagaacacgagtttgggaaagaggaagcggaataacaatg
gcctgtggaacaggggcttgtgccacggccgtagccgcattccttaccaagcgtgctgga
cgaaaaagcagtatcgtgatggatggaggaactttgcaaatcgaatataacgaggaagac
gaacacgtatatatgactggtcctgcagccttcgtattcgagggtgagattcaggtggaa
tga
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