Segatella hominis: KUA50_012400
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Entry
KUA50_012400 CDS
T09571
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
shoi
Segatella hominis
Pathway
shoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUA50_012400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shoi03019
]
KUA50_012400
03009 Ribosome biogenesis [BR:
shoi03009
]
KUA50_012400
Enzymes [BR:
shoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KUA50_012400
Messenger RNA biogenesis [BR:
shoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KUA50_012400
Ribosome biogenesis [BR:
shoi03009
]
Prokaryotic type
rRNA helicases
KUA50_012400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
RRM_1
UvrA_inter
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WOZ80837
LinkDB
All DBs
Position
3067229..3069166
Genome browser
AA seq
645 aa
AA seq
DB search
MKTFEELGVSEEIRRAIEELGFENPMPVQEEVIPYLLGNKNDVIALAQTGTGKTASYGIP
VIQKTDADSKQTQAIILSPTRELCLQIADDLNSFAKYIDGLHIAAVYGGTDIGSQIRTLK
HGVQIIVATPGRLLDLINRGVAQLEHVNNVVLDEADEMLNMGFSESINAIFESVPEDRNT
LLFSATMSKEIEKIALNYLHDHKEIVVGSRNEGAEHVNHIYYLVNAKDKYLALKRIVDYY
PRIFAIIFCRTKLETQDIADKLIKDGYNAEALHGDLSQQQRDLTMQKFRNHTVQFLVATD
VAARGLDVDDLTHVINYGLPDDVASYTHRSGRTGRAGKKGTSISIIHTREKFKVRQIEKQ
IGKEFVDGVLPTPEEICKKQLFKTMDDIMKTDVDEDQIEPYMAEINRQFEYIDKEDIIKK
MVTITFGKFLDYYKNAPEIVKPESGKGSRSGEGRGSRGERGKVSNGRRKHETEAGFKRLF
INLGKADGFYPGEIMQYLNKHVKGRQEVGHIDLLSKFAYIEVPEEDAKRVMKALNGTEYK
GRTVRCNDADEEGHGRAARGGGRDAEGRSGRGGRSAEKGSRGRRGSDDARSERGGRGSRG
GKKTRREEETGDWRQFFQNNDNVKFKGEEPNFEEEGWARRRPKKK
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacatttgaagaattgggcgtgagcgaagagattcgccgtgccatcgaagagctt
ggatttgagaatccaatgccagttcaggaagaagtaatcccatatttgcttggtaataag
aacgacgtgattgcgttggcgcagacgggtacgggtaaaaccgcatcctatggtattcct
gtcatccagaaaaccgatgctgatagcaagcagacacaggctatcatcctcagtcctaca
cgtgagctctgcctccagatagcagacgatttgaacagttttgccaagtacatcgacggt
ttgcatattgccgcagtttatggcggtaccgacatcggaagccagattcgcaccctgaag
catggtgtgcagattatcgtggctacccctggtcgtctgctcgatttgattaatcgtggt
gtggctcagttggagcacgtcaataacgtggtgcttgatgaggctgacgagatgctcaac
atgggtttctcggagagcatcaatgccatcttcgagagtgtgccagaggatagaaacaca
ttgctcttctctgctaccatgagtaaggagattgagaagattgccctcaactatctgcac
gaccacaaggaaatcgtggtaggttctcgtaacgagggtgccgagcacgtgaatcacatc
tactatcttgtgaatgccaaggacaagtatcttgccttgaagcgcatcgtcgattattat
ccacgcatctttgcgattatcttctgccgcaccaagctggagactcaggatattgcagat
aagttgattaaggatggttataatgcagaagccctgcacggcgacttgagtcagcagcag
cgtgacctcaccatgcagaagttccgcaaccataccgttcagttcctggtggctaccgat
gtggctgcccgtggtcttgatgttgacgatctgactcacgtcatcaactacggtttgcct
gacgatgtggcaagttatacccaccgaagcggtcgtaccggtcgtgccggaaagaaggga
acatccatctctatcatccataccagagagaagttcaaggttcgccagattgagaagcag
ataggtaaggagttcgtggacggcgttttgcctaccccagaggaaatctgcaagaagcag
ctcttcaagaccatggacgacattatgaagaccgatgtggacgaggatcagattgaacca
tacatggcagaaatcaaccgccagtttgagtacatcgacaaggaggacatcatcaagaag
atggtaaccatcaccttcggtaagttcctggattactacaagaatgctccagagattgtg
aagccagagagcggcaagggttcacgtagcggagaaggtcgtggaagccgtggcgagcgt
ggtaaggtttccaatggtcgcagaaagcatgagactgaggctggtttcaagcgcctcttc
atcaatctgggtaaggcggatggtttctatccgggcgaaatcatgcagtatctgaacaag
cacgtgaagggtcgccaggaggtgggtcacatcgacctgctgagtaagtttgcctacatc
gaggtgcctgaggaagatgcgaagcgcgtgatgaaggctttgaacggaactgagtataag
ggcagaaccgtaagatgtaatgatgctgacgaggaaggtcatggcagagcagcccgtggt
ggtggccgtgatgctgagggcagaagtggtcgtggcggtcgttctgcagagaagggttcc
cgtgggcgcagaggttctgatgatgctcgttctgagcgtggaggtcgtggaagccgtggc
ggaaagaaaacgcgtcgtgaagaggaaacaggcgactggcgtcagttcttccagaacaat
gataatgtgaaattcaagggcgaggagccaaacttcgaggaagaaggttgggctcgccgc
cgtcctaaaaagaagtaa
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