Staphylococcus hominis: EGX58_00415
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Entry
EGX58_00415 CDS
T06045
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
shom
Staphylococcus hominis
Pathway
shom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGX58_00415 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shom03019
]
EGX58_00415 (pnp)
03016 Transfer RNA biogenesis [BR:
shom03016
]
EGX58_00415 (pnp)
Enzymes [BR:
shom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EGX58_00415 (pnp)
Messenger RNA biogenesis [BR:
shom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EGX58_00415 (pnp)
Transfer RNA biogenesis [BR:
shom03016
]
Prokaryotic type
tRNA degradation factors
EGX58_00415 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
S1_2
KH-I_KHDC4-BBP
OB_PDCD11
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AYY65447
LinkDB
All DBs
Position
complement(49740..51836)
Genome browser
AA seq
698 aa
AA seq
DB search
MSQEKKVFKTEWAGRSLTIETGQLAKQANGAVLVRYGDTVVLSTAVASKEPRDGDFFPLT
VNYEEKMYAAGKIPGGFKKREGRPGDEATLTARLIDRPIRPLFPKGYRHDVQIMNTVLSA
DPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDGTYVINPTLEQKEVSRLDLEVA
GHKDAVNMVEAGASEITEQEMLEAIFFGHEEIKRLVAFQEEVVEHIQPVKKEFIPVERDE
ELVQRVKSLTEEKGLKETVLTFDKQQRDENLDALKAEIATEFVDEADPENELLIDEVYAI
LNDLVKEEVRRLIADEKIRPDGRKPDEIRPLESEVGLLPRAHGSGLFTRGQTQALSVLTL
GALGDYQLIDGLGPEIEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALRYIIP
DTTEFPYTIRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTREDSYT
ILTDIQGMEDALGDMDFKVAGTKEGITAIQMDIKIDGLTREVIEEALEQARQGRLAIMDH
MLQTIDQPRSELSAYAPKVEIMHIKPEKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIF
IGAVDQEMINRAREIINEITREAEVGQVYHAKVKRIEKYGAFVELFPGKDALLHISQISK
DRINKVEDVLKIGDTIEVKITEIDKQGRVNASHKVLDE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaaaagaaagtgttcaaaaccgaatgggctggaagatcgttaacgattgag
acaggtcaattagcgaaacaagctaatggtgcagttttagtacgttatggtgatactgtt
gtattatctacagcagttgcttctaaagagccacgtgatggtgattttttccccttaaca
gttaactatgaagaaaaaatgtatgcggctggtaaaattccaggtggatttaaaaaacgc
gaaggtcgtcctggagatgaagcgacacttactgcacgtttaattgatagaccaattaga
ccattattccctaaaggttatcgacatgacgttcaaattatgaatactgtattaagtgcg
gacccagactgctccccagaaatggcagcaatgattggatcgtcaatggcattgagcgtg
tctgatattccattccaaggaccaattgccggtgttaatgtaggatatattgatggaaca
tacgtgattaatccaacacttgaacaaaaagaagtatctcgtttagatttagaagttgct
ggtcataaagatgctgtaaatatggttgaagcaggtgcgagtgaaattacagaacaagaa
atgcttgaagcgattttctttggtcatgaagagataaaacgcttagttgctttccaagaa
gaagttgttgagcatattcaacctgtgaaaaaagaatttattcccgttgaacgtgatgaa
gaattagtacaacgagtaaaatctttaacggaagaaaaaggattaaaagaaactgtatta
acatttgacaaacaacaacgtgatgaaaatttagatgcacttaaagcagaaatcgctact
gaatttgtagacgaagcggacccagaaaatgagttgcttatcgatgaagtatatgcaatc
ttaaatgatttagtaaaagaagaagttcgtcgattaattgcagatgaaaaaattagacct
gatggacgtaaaccagatgaaattcgtccgcttgaatcagaagttggtttattaccacgt
gcacatggttctggattgtttacccgtggacaaactcaagcattatctgtacttacttta
ggagcattaggagactatcaacttattgatggattaggacctgaaattgaaaaacgtttt
atgcaccactataattttcctaatttctcagtaggtgaaacgggtccagtaagagcgcca
ggtcgtcgtgaaattggtcacggtgcactaggtgaaagagcacttagatatatcattcct
gacactacagagtttccttacacaattcgtattgtgagtgaagtattagagtcaaatggc
tcatcttcacaagcttcaatttgtggatcaacattagcgttaatggatgctggtgtacct
attaaagctccagtagccggtattgctatgggtcttgtcactcgtgaagacagttataca
attttaactgatattcaaggtatggaagatgccttaggtgatatggacttcaaagttgct
ggaactaaagagggtattactgcgattcaaatggatatcaaaattgatggtttaacacgt
gaagtgattgaagaagctcttgaacaagctcgtcaaggtcgtttagctattatggatcat
atgttacaaacaatcgatcaaccacgtagtgaattaagtgcatatgcacctaaggtagaa
attatgcatatcaaacctgaaaaaattcgtgatgtcattggtccgggtggtaaaaaaatt
aatgaaattattgacgaaactggcgttaagttagatattgaacaagatggtactatcttt
attggcgctgttgatcaagaaatgataaatagagctcgagaaattattaatgaaattaca
cgcgaagctgaagtgggtcaagtatatcatgcaaaagttaagcgtattgaaaaatatggt
gcttttgtagaattattcccaggtaaagatgctttattacacatttctcaaatttctaaa
gatagaataaataaagttgaagacgttttaaaaatcggtgatacgattgaagttaaaatt
acagaaattgataaacaaggccgtgtaaatgcgtctcataaagttttagatgaataa
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