Staphylococcus hominis: EGX58_08020
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Entry
EGX58_08020 CDS
T06045
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
shom
Staphylococcus hominis
Pathway
shom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGX58_08020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shom03021
]
EGX58_08020
03019 Messenger RNA biogenesis [BR:
shom03019
]
EGX58_08020
Transcription machinery [BR:
shom03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EGX58_08020
Messenger RNA biogenesis [BR:
shom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EGX58_08020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
Mor
ATPase_2
AAA
AAA_25
Spore_III_AA
YopJ_bacilli
Motif
Other DBs
NCBI-ProteinID:
AYY66866
LinkDB
All DBs
Position
1597030..1598346
Genome browser
AA seq
438 aa
AA seq
DB search
MPERERTSPQYESFHELYKNYTTKELTQKAKSLKLTNYSKLNKSELVLAIMEAQMEKDGN
YYMEGVLDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDENAEVVKKRPHFQALTPLYPEERIILETEPRNYSTRIMDLVTPIGLGQ
RGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVGERPEEVTDIERSVESAEVVHST
FDEPPQHHVKVAELLLERAKRLVEIGQDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLSE
RRIFPAIDIGRSSTRKEELLISKSELESLWQLRNMFTDSTDFTERFIRKLKRSENNKEFF
EQLQKAAAESTKTGKPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaagagaacgaacatcaccacaatatgaatcttttcatgaattgtataaaaat
tatacgacaaaagaacttacgcaaaaagcaaaatcattaaaactaactaattatagtaaa
ttgaataaaagtgagcttgtcttggcaattatggaagctcaaatggaaaaagatggaaat
tactatatggagggggttttagatgatatacaacctgatggatatggttttttaagaacc
gttaattattctaaaggtgaaaaagatatatatatatcagctagtcaaattagacgtttt
gaaattaaacgaggcgataaagtaactggaaaagtacgaaagcctaaagacaatgaaaaa
tactatggacttctacaagttgactttgttaatgatgaaaatgcagaagttgtaaaaaaa
cgtcctcatttccaagcacttactccgttatatccagaggaaagaattattcttgaaaca
gagcctcgaaattattctactcgaattatggatttagttactccaattggtttaggtcaa
cgtggtcttattgtcgctcctcctaaagctggtaaaacttcattacttaaagaaattgca
aatgcaattagtacaaataaaccagatgctaaattatttatattattagtaggtgaacga
cctgaagaggtaactgatatagagcgttcagtagagtcagcagaagtagtacattccact
tttgatgaacctcctcaacatcacgttaaggtagcagaattattattagaaagagcaaaa
cgtcttgtagagataggacaagatgtcattatcttgatggactctattacgcgtttagca
agagcatataaccttgttatcccgcctagtggtagaacattgtcaggtggcttggatcca
gcatccttacataagcctaaagcatttttcggtgctgctcgtaatattgaagcaggtggt
agcctaactattttagcaacggctctagtagatacaggttcacgtatggatgatatgatt
tatgaagagttcaaaggtacaggtaatatggaacttcatcttgatcgtaaattatctgaa
cgtcgaatattcccagctattgatattgggcgtagttctacgcgtaaagaagaattatta
attagtaagtctgaattagagtcattatggcaacttagaaatatgtttactgattctacc
gattttacagagcgttttataagaaaattaaaacgttcagaaaataacaaagaatttttt
gaacaattgcaaaaggcagccgctgaaagtacaaaaacaggaaaaccaattatctaa
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