Staphylococcus hominis: EGX58_09850
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Entry
EGX58_09850 CDS
T06045
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
shom
Staphylococcus hominis
Pathway
shom03410
Base excision repair
shom03430
Mismatch repair
shom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EGX58_09850 (recJ)
03430 Mismatch repair
EGX58_09850 (recJ)
03440 Homologous recombination
EGX58_09850 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shom03400
]
EGX58_09850 (recJ)
DNA repair and recombination proteins [BR:
shom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EGX58_09850 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EGX58_09850 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EGX58_09850 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
AdoHcyase
Motif
Other DBs
NCBI-ProteinID:
AYY67183
LinkDB
All DBs
Position
1941129..1943402
Genome browser
AA seq
757 aa
AA seq
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MIQSKYKWLYEAPKQNISSEIIKEFNLSPIVRKILESKSITQYDEINTLINGTNKKHDSW
LMSDMQKAVDRINLAIDKNERILVYGDYDADGVTSTTILVQTLRKLGAEVGWYIPNRFSE
GYGPNKYAFQNAYDEGVSLIITVDNGIQGHEEIEMVQVLGVDVIVTDHHEIGRTLPKAYA
IIHPMHPEFEYPFKYLCGAGVAYKLSQCLIDHPPEYFIVLATIGTIADLVSLTDENRTIV
QEGLKYLNQSCPFQIQSLLNQAGFNDEIDEETIGFIIGPRLNAVGRLEDASLAAELLMAE
DSEEANFLAEQVEAFNIERKDIVAQITEEALLMANEKVENGDKFLLLAKEGWHEGVLGIV
ASKIVETYALPTLILNIDLEQHHAKGSARSIEQVSMFEILSAHQDLISKFGGHHMAAGMT
MEIDNIDALSKGLNEWMVQLSKHTSLEPTKHITTKLSEDDITVSNIHDIKILKPFGTDFE
KPLFELDDTEVNDVKAIGKDKNHLKLVTGQAKLQHLFWKNGGLITQIELGQPVNIIGHLQ
INEWNGNQTPQMMIQDLATQNEQILDYRSKRKQLNIDTSSKNVAFVIHSKKEKLGENYFH
YGETIDSSYNTIVFRDLPTDLDSVKQSLKHLEYSQLYLVLHHQHSIYFEGLPSSHLFKQS
YKALFIRKEMNLEKEGLQLCQYLNIKPNTLKFILKVFLDLSFIYEENGIIKINDNPSKQS
IESSQVYKSRQSRIEVEKLMLYDDFSHLKNWIKAQKA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgattcaatctaaatataaatggctttatgaagcacctaaacaaaatatatcgtctgag
attattaaggaatttaatttatctcctattgtaagaaagattttagaaagtaaatcgatt
acacagtacgatgagataaatacattaattaatggtacaaataaaaagcatgattcatgg
ctaatgagtgatatgcaaaaagctgttgatcgaattaatttagcgattgataaaaatgaa
agaatattagtatatggagactatgatgccgatggcgtaacatctacaacgatattagtt
caaacactgcggaaattgggcgctgaagtcggttggtatattcctaatcgatttagcgaa
ggttatggcccaaataaatacgcctttcaaaatgcttacgatgaaggcgtatcacttatt
attacagttgacaatggaatacaaggtcatgaagaaattgaaatggtacaagtattagga
gtcgatgtaattgttacagaccatcatgaaataggccgtacattaccaaaagcatatgcc
attattcatcctatgcatccagaatttgagtatccatttaaatatttatgtggagccggt
gtcgcatacaaattatcgcaatgtttaatagatcatcctccagaatatttcatagttctt
gcaactattgggacgattgcagatttagtgtcactgactgatgaaaacagaacgattgtt
caagaaggtcttaaatatttaaatcaatcctgtccatttcaaattcaatcattattaaat
caagcaggatttaatgatgagatagatgaagaaacaattggtttcattattggacctcgt
ttaaatgcggtaggtagattagaagatgcgtcattagcagcggaattactgatggcagaa
gattctgaagaggcgaattttttagctgaacaagtagaggcatttaacattgaacgtaaa
gatattgtagctcaaataacagaagaagccctattgatggctaatgaaaaagttgaaaat
ggcgacaaatttttacttttagctaaagaaggatggcatgagggagtattaggtattgtg
gcttcaaaaattgtagaaacttatgctttacccactcttattttaaatatagatttagaa
caacatcatgcaaaaggttcagctagaagtattgaacaagtgtccatgttcgaaatttta
agtgcacatcaagatttgatatctaaatttggtggtcatcatatggcagctggaatgacg
atggagattgataatattgatgcattatcaaaaggactaaatgagtggatggttcagctt
tctaaacatacttctttagaaccaacaaaacatattacgactaaactttcagaagatgac
attactgtatcaaatattcatgatattaaaatactgaaaccgtttggtactgattttgaa
aaacctttatttgaattggatgatacagaagttaatgatgttaaagcgattggaaaagat
aaaaatcatttaaaattagtaactggtcaagctaagttacaacatttattttggaaaaat
ggtggtttaattacacaaatagaattaggccaacccgtcaatatcataggacatttacaa
ataaatgagtggaatggcaatcagacacctcaaatgatgatacaagatttagcgactcaa
aatgagcaaatattagattatagaagtaaacgtaaacaacttaacattgatacgtcatct
aaaaatgttgcttttgtcattcattctaaaaaagagaagctaggggagaattatttccac
tacggtgaaacaattgattcatcatataatacgattgtatttcgtgatttaccaactgat
ttagatagtgttaaacaatctctaaaacatttagaatactcacaactctatttagtatta
caccatcaacattcaatttatttcgaggggttaccgagtagtcatctatttaaacaaagt
tataaggcactattcattaggaaagaaatgaatttagaaaaagaaggtttacaattatgt
caatacttaaatattaagccaaatactttaaagtttattttaaaagtatttcttgaccta
agttttatttacgaagaaaatggtataattaaaataaatgataatccaagtaaacaatct
attgagtcgagtcaagtttataaatcgagacagtcaagaattgaagttgaaaaattaatg
ctttatgatgacttttcacatcttaagaattggattaaagctcaaaaagcgtaa
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