Sturnira hondurensis: 118974442
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Entry
118974442 CDS
T07222
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
shon
Sturnira hondurensis
Pathway
shon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118974442 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shon03041
]
118974442 (PRPF40A)
Spliceosome [BR:
shon03041
]
Complex A
U1 snRNP components
U1 related factors
118974442 (PRPF40A)
Complex B
118974442 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
WW_2
DUF5803
Motif
Other DBs
NCBI-GeneID:
118974442
NCBI-ProteinID:
XP_036883731
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MQATPSEAEAGGESPQSCVPAAHSDWTAGKPVSLLAPLIPPRSAGQPLTLSPSGRQPLRS
LLVGICSGSGRRRSSLSQTMRPGTGAERGGLMVSEMESHPPSQGPGDGERRLSGSSLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGASGAKSMWTEHKSPDGRTYYYNTE
TKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQ
NTIVAGSLITKSNLHAMIKAEESSKQEECTTASTAPVPTTEIPTTMSTMAAAEAAAAVVA
AAAAAAAAAAAANASASSSASNTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQL
TSTPAIQDQSVEVSSNAGEETSKETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKEL
LKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEA
KESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQA
KQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEE
HIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSD
IRFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDF
VAVISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATP
PIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSK
KHHRKRSRSRSGSDSDDDDSHTKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKR
RHKSDSPESDAEREKDKKDKDRESEKDRTRQRSESKHKSPKKKTGKDSSGNWDTSGSELS
EGELEKRRRTLLEQLDDDQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacaccaagtgaggctgaggccgggggcgaatcgccgcagagctgcgtgccg
gcagcgcactctgattggacagcggggaagcctgtcagcttattggccccgctgatcccg
ccccgtagtgccgggcagcctttaacccttagccccagcgggcgccagccactcagatcg
cttcttgttggtatatgcagcggcagtggccgccggcggagcagtctgagccagacgatg
aggccagggacgggagccgagcgaggaggcctcatggtgagtgaaatggagagccatcct
ccctcgcagggtcctggggacggggagcggagattgtccggctcaagcctctgctccagc
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcatcctggcatg
cattatgccccaatgggaatgcacccaatgggtcagagagcaaatatgcctcctgtacct
catggaatgatgccacaaatgatgcccccaatgggaggcccgccaatgggtcaaatgcct
ggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatg
cagcctgccttaccgccaggagtaaataatatggatgtagcagcaggtgcatcaggcgca
aaatcaatgtggactgaacataagtcacctgatggaaggacttactactacaatactgaa
acaaaacagtctacttgggagaaaccagatgatcttaaaacacctgctgagcaacttttg
tctaaatgcccctggaaagagtacaaatctgactctggaaagccatactattataattct
caaacaaaagaatcccgttgggccaaacctaaagaacttgaagatcttgaaggataccag
aataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagct
gaagaaagcagtaagcaagaagagtgcaccacagcatcaacagccccagttcctacaaca
gaaattccgaccacaatgagcaccatggctgctgcagaggctgcagctgctgttgttgca
gctgccgctgctgccgctgctgccgctgcggctgccaatgccagtgcctccagctctgcc
tctaatactgtcggtggaactgttccagttgttcctgagcctgaagttacttcaattgtt
gctactgttgtagataatgaaaacacagtaacaatttcaactgaagaacaagcacaactt
actagtactcctgctattcaggatcaaagtgttgaagtgtccagtaatgctggagaagag
acatctaaggaaactgtagctgattttactcccaaaaaagaagaggaagaaagccaacca
gcaaaaaaaacatatacttggaatacaaaggaagaggcaaagcaagcatttaaagaatta
ttgaaagaaaagcgggtaccatctaatgcttcatgggagcaagctatgaaaatgatcata
aatgatccacgatacagtgctttagcaaagttgagtgaaaaaaagcaggcctttaatgcc
tataaagttcagacagagaaagaagaaaaagaagaagcaagatcaaagtacaaagaagct
aaggaatcctttcagcgttttctagaaaatcatgagaaaatgacatccacaaccagatac
aaaaaagcagagcaaatgtttggtgagatggaagtctggaatgcaatatcggaacgtgac
cggcttgaaatctatgaagatgttttattctttctttcaaagaaagaaaaggaacaagca
aagcagttgcgaaaaagaaattgggaagccttaaaaaacatacttgacaacatggctaac
gtaacatactctactacttggtcagaagcccagcagtatctcatggataatccaactttt
gcggaagatgaggaattacagaacatggataaagaagatgcattaatttgctttgaagag
catatccgggctttagaaaaggaagaagaagaagaaaaacagaagagtttgctgagagaa
cggagacggcagcgtaaaaatagagaatcttttcagatatttttagatgaactgcatgaa
catggacaactgcattctatgtcatcttggatggaattgtatccaacaattagttctgac
attagattcactaatatgcttggtcagccggttttttcattaggatcaactgcacttgac
cttttcaagttttatgttgaggatcttaaagcacgttatcatgatgagaagaagataata
aaagacattctaaaggataaaggatttgtagttgaagtaaatactacttttgaagacttt
gtggcagtaatcagttcaactaaaagatcaaccacattagatgctggaaatattaagttg
gcttttaatagtttactagaaaaggcagaagcccgtgaacgtgaaagagaaaaagaggag
gctcgaaagatgaaacgaaaagagtctgcatttaagagtatgttgaaacaagctactcct
ccaatagagttggatgctgtctgggaagacatccgggagagatttgtaaaagagccagca
tttgaggacataactctagagtctgaaagaaaacgaatatttaaagactttatgcatgta
cttgagcatgaatgtcaacatcatcattcaaagaacaagaaacattctaagaaatccaaa
aaacaccacaggaaacgttcccgctctcgatctgggtcagattcagatgatgacgacagc
catacaaagaaaaaaagacaacgatcagagtctcgttctgcttcagaacattcttctagt
gctgagtctgagagaagttacaagaagtcaaaaaaacataagaaaaaaagcaagaagagg
agacacaaatctgattctccagagtcagatgctgagcgagagaaggataaaaaagacaaa
gaccgggaaagtgagaaagacagaactagacaaagatctgaatcaaaacacaaatcacct
aagaaaaagactggaaaggattcttctggtaactgggatacttctggcagtgaactgagt
gaaggggaattggaaaagcgcagaaggacccttttggagcaactggatgatgatcaataa
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