Sturnira hondurensis: 118975371
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Entry
118975371 CDS
T07222
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
shon
Sturnira hondurensis
Pathway
shon04151
PI3K-Akt signaling pathway
shon04382
Cornified envelope formation
shon04510
Focal adhesion
shon04512
ECM-receptor interaction
shon04518
Integrin signaling
shon04820
Cytoskeleton in muscle cells
shon04926
Relaxin signaling pathway
shon04933
AGE-RAGE signaling pathway in diabetic complications
shon04974
Protein digestion and absorption
shon05146
Amoebiasis
shon05165
Human papillomavirus infection
shon05200
Pathways in cancer
shon05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118975371 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118975371 (COL4A4)
04518 Integrin signaling
118975371 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118975371 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118975371 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
118975371 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
118975371 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
118975371 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118975371 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
118975371 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
118975371 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
118975371 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
118975371 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shon04147
]
118975371 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
shon00536
]
118975371 (COL4A4)
Exosome [BR:
shon04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118975371 (COL4A4)
Glycosaminoglycan binding proteins [BR:
shon00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118975371 (COL4A4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118975371
NCBI-ProteinID:
XP_036885165
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MELVRCAFRWIKPLATNPWSLILIVFSMQHAYGSGKKFPGPCGGRDCSACQCVPEKGSRG
QPGAPGPQGPIGPPGPPGPVGIPGEKGMRGDRGPPGAAGGRGDKGPTGVPGFSGLDGIPG
HPGPPGPRGKPGVDGYNGSRGDPGFPGEGGAPGPRGPPGLPGEIGEKGNSVFIFGAIKGM
QGDRGDPGPPGVPGSRGARGPVGPMGYPGEPGAPGPPGHPGSPGVKGNPGVGVKGQMGDP
GEVGQQGSPGPTLLVQPPDSSLYKGEKGVKGMPGMTGPPGPPGPKGEPGVGEKGEKGVPG
FPGPRGEPGSYGSPGFPGLKGEKGYPGIPGPPGLPGTKGDTGDRGPPGPPGILMTPPPPL
KGPPGDPGLPGHCGEMGAVGLPGPPGPPGLPGEACPGTTGLPGPPGFPGHPGVPGAAGAP
GRPDLAPGRPGPPGPPGLPGAPGLQGPPGSDVMYCSVGHPGPQGVKGKMGPPGRRGSKGE
KGNAGPCACQPGPVGSPGLPGLPGTQGSKGDLGPRGWPGEKGHPGPPGAEGSPGPPGTPG
APGLPGNKGEKGDRVVARVKGHKGERGPDGLPGLPGQRGQHGWDGQPGAPGDPGPPGDHE
DAAPGDRGFPGQPGPPGREGPQGPPGLGFPGPPGERGQPGAPGRPGERGPDGPKGQKGDT
ISYNVSYPGKPGPPGADGPPGPRGFPGPRGAPGLRGFDGQKGRPGKPGLSKIPGPPGVPG
VMGDPGLEGHKGSSPAGPPGPPGLPGPDGQKGNPGDPAYGLPGPPGKRGPSGMPGLKGLR
GDPGHPGPAGPAGMPGIPGVKGPKGREGGAGFPGIPGPPGHSCERGAPGRPGPPGLPGAP
GSPGAPGWKGQRGEAGPPGPAGMKGLPGVPGRPGVEGPPGPPGIPGPFGDDGLPGHPGPR
GPQGLPGLPGFPGERGKPGPEGHRGRKGDIGEKGWPGFGGDQGVRGAKGDTGSPGDEGEM
AVISKKGNSGETGPPGDDGPPGEGGDKGYPGMPGRKGDPGRPGPPGFHRGEPGENGWPGL
PGPPGPPGFPGPRGIIGFPGFPGDQGEPGFPGPPGPSGIDGMRGPKGNKGDPASQFGPPG
PKGEPGSPGCPGHLGAPGEKGLPGAEGPGGPPGRPGLPASPGPQGCPGYPGRPGPMGPPG
EIGDPGPRGLIGDPGPPGPPGGKGSSGLPGLNGLHGLKGQKGTKGASGLHEMGPPGPMGK
PGKKGETGDPGSPGISPPGLFGEKGPPGPPGRPGPPGPAGAPGRAPTGDIPDPGPPGDQG
LPGPDGPQGPPGPPGPPGTVDLVPGEPGDCGLPGPPGPPGPAGPPGRKGYPGCDGQDGWK
GPMGFPGPQGPHGLPGSPGEKGLPGPPGRRGPPGPPGSRGEPGPPADLDACPRIPGLPGV
PGPRGPEGAMGPPGMRGPPGAGCKGEPGPDGRRGEDGIPGPPGPPGHKGDMGEAGLPGAP
GPPGPTGDPGPKGSGPGYLSGYLLVLHSQTDGEPTCPMGMPKLWTGYSLLYLEGQERAHN
QDLGLAGSCLPVFSTLPFAYCNIHQVCHYARRNDRSYWLASAAPLPMTPLSEEDIRPYIS
RCAVCEAPAQAVALHSQNQSIPPCPRAWRSLWVGYSFLMHTGAGDQGGGQALTSPGSCLE
DFRAAPFLECQGRQGTCHFFANKYSFWLTVVQPHLQFAEAPSPDTLKDSQAQRQKISRCQ
VCVKVS
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggagttagtaaggtgcgctttcaggtggatcaagcccttggccacaaacccctggtca
ctcatccttatcgtcttttctatgcaacatgcgtatgggagcggaaagaagttccctggt
ccttgtggaggaagagattgctccgcttgccagtgcgtccctgagaaggggtctcgggga
caaccaggagcaccagggccccagggtcctattggaccaccaggacctccgggacccgtc
gggattccaggagagaaggggatgagaggggacaggggcccccctggagcagcaggtgga
agaggagataagggtccgactggtgttcctggattttcaggtttggatggtatacctgga
cacccagggcctcctggacccagaggcaaacctggcgtggatggctacaacggatccaga
ggcgatccagggtttccaggggaaggaggagctcctggtcccagaggccctccaggcctt
cctggggaaattggagaaaaaggaaattccgtgttcatttttggtgccatcaaaggtatg
cagggtgacagaggggacccaggacctcccggcgtaccaggatcaaggggcgctagagga
cccgtaggccccatgggctacccaggagagccaggggcaccaggacctccgggccatcct
gggagtccaggtgtgaagggtaatcctggcgtgggagtaaaggggcaaatgggagacccg
ggtgaggtcggccaacaaggttctcccggacccaccctactggtacagccgccggattct
agtctctataaaggagagaagggtgtaaaaggaatgccgggaatgactggacctccagga
cctccaggacccaagggagaacctggcgttggggaaaaaggagaaaagggtgttcctggc
ttcccaggccctcggggtgagcccggctcctatggatctccaggttttccaggattaaag
ggggaaaaaggatatcctggaatccccgggccacctggacttccgggtacaaagggggat
actggagaccgtgggcccccaggaccaccggggattttgatgactccacctcctccactc
aaaggccctccgggagatccaggcctccctggccactgtggagaaatgggggctgtgggg
ctccctggtccccccggtcccccaggtctaccaggggaagcctgtccaggcacaacggga
ctccccgggccgccagggtttcccggtcaccccggagttccaggggcagcaggtgctccc
gggaggcccgatttggctccggggagaccagggcccccagggccccctgggttgcctgga
gcaccgggacttcaggggcctccaggatcagatgttatgtattgtagtgtggggcatcct
ggaccacaaggagtaaaaggcaaaatgggtcctcccggaagaagaggctcgaaaggagaa
aaaggaaatgcggggccctgtgcctgccagcctggccccgtgggctcgccaggccttccc
ggacttcctgggacgcagggtagtaaaggagacttggggccccgcgggtggcctggagag
aaaggtcacccgggccctcctggtgctgaaggatctccagggccaccaggaacacctggt
gccccaggactgcctggcaacaaaggagaaaagggagacagggttgtagcaagagtgaaa
gggcacaaaggagaaagaggtcctgatgggctcccaggacttccagggcagcggggacaa
catggttgggatggacaacctggcgcaccaggggacccaggccccccgggggatcacgaa
gacgcggccccaggtgaccgagggtttcctggacaaccaggcccccctggaagagaagga
ccgcagggccctccaggactgggatttcctggcccaccgggagaaagggggcagccagga
gccccaggccgcccgggtgagaggggccctgatggcccgaagggtcagaaaggtgataca
atttcttataatgtcagctatcctgggaagccaggccctccgggtgctgatggacctcca
ggtccaagaggatttccaggtcctcggggtgctcctgggctgaggggttttgacgggcaa
aaaggtcggcctggcaaaccgggactatcaaagatacctggtccacctggtgttcctggt
gtcatgggagatccaggcttggaagggcacaagggctcctctcctgccgggcccccaggc
cctcctggtttacctggaccggatggtcagaaaggaaaccctggagaccctgcttatggc
ctcccaggacccccgggaaagaggggtccttcaggaatgccagggctgaaaggactcagg
ggtgacccaggacatcccgggcctgcagggccagctggcatgcccggaatcccaggtgtc
aaaggccctaaaggcagagagggaggtgccgggtttccaggtatcccaggtccacccggc
cattcctgtgaaagaggtgctcccgggagaccagggccaccaggtctccctggggctcca
ggcagtccaggtgccccgggctggaaaggacagcgaggggaggcggggcctcctggacca
gctggaatgaagggcctcccaggagtcccaggaaggccaggggtagaaggacccccagga
cccccaggaatcccaggcccctttggggatgatggactacctggccatccaggccccagg
ggcccccaggggctgcctggcttgccaggttttcctggagagagaggaaagcctggccct
gagggacaccgtggcagaaagggggacatcggagagaagggctggcctggcttcggggga
gaccagggagtgagaggtgccaaaggagacacaggatccccgggagatgaaggagaaatg
gctgtaatttccaaaaaggggaactccggggaaactggacctcctggggatgatggaccc
ccgggagaaggaggtgataaaggctatcctgggatgccggggagaaaaggagacccagga
agacccggaccacctggatttcacagaggagagcctggtgaaaatgggtggccagggctt
cctggacccccaggccctccaggcttccctgggccgagagggatcattggctttcctgga
tttccaggcgatcagggtgagccgggttttccagggccccctggaccttccggaattgat
ggaatgagaggacccaaaggaaacaaaggagatcctgcaagtcagttcgggccacctggt
ccaaagggtgagcctggcagccccggatgtccagggcacttgggagcacccggagagaag
ggcttgcctggagccgaggggcctggaggaccaccaggaaggccagggctgccagcttcc
cccggaccgcaggggtgtccaggttacccagggaggcccgggccaatgggacctccagga
gaaatcggggatcctggaccaagaggcctcatcggggatcctgggccaccaggtcctccg
gggggaaaaggttcctctgggctacctggcctgaatggcttgcatggtttaaagggtcag
aaaggaaccaaaggagcttcaggtttacatgaaatgggcccaccgggtccaatggggaag
cctgggaagaaaggggagacaggagaccccggcagtccaggaatttctcctccaggcctt
tttggagaaaaaggccccccaggccctccagggaggcctggaccgcctgggcctgcaggt
gccccaggaagagctcccacaggtgacattcctgacccgggtccacccggagatcaagga
cttcctggccctgatggtccacaaggaccgcccgggcctccagggccccctgggactgtc
gaccttgtgccaggggaaccaggtgactgtggcctgccaggacctccaggccccccgggc
ccagcaggccctccaggacgcaaaggctacccagggtgtgacgggcaagatggctggaaa
ggtcccatgggattcccggggccacaggggccacacggacttcctgggtcacctggagag
aagggtttacctggccctccaggcagacgagggcccccagggcctccaggttccagaggt
gaaccggggccccctgcagatctggatgcctgcccccgaatcccggggctccctggggtg
ccaggcccgagaggacccgaaggggccatggggccccctggaatgagaggccctccagga
gcagggtgcaaaggagagcccgggccggatggcaggaggggcgaggatggcatcccaggg
cctcccgggcctccaggacacaaaggcgacatgggagaagccggcctccctggagcacca
ggccctcctgggcccactggggatcctgggcccaaggggtccggccctgggtacctcagt
ggctacctcctggtcctccacagtcagacggatggagagcccacctgccccatgggcatg
cccaagctctggacgggctacagcctgctgtacctggaaggacaggagagagctcacaat
caagaccttggtctggccgggtcttgcctgcccgtgttcagcacgctgcccttcgcctac
tgcaacatccaccaggtgtgccactacgcccgcagaaacgaccggtcctactggctggcc
agcgccgcgccactgcccatgacgccgctgtcggaggaggacatccgcccctacatcagc
cgctgcgccgtgtgcgaggccccggcgcaggccgtggcgctgcacagccagaaccagtcc
atccccccgtgcccgcgggcctggcgcagcctctgggtcgggtactccttcctgatgcac
acgggagctggggaccaaggaggagggcaggctctcacctcgccgggcagctgcctggaa
gacttcagagcagcgccattcctggaatgccaaggccggcaggggacttgccactttttc
gccaataagtacagcttttggctgacggtggtccagccacacttgcagtttgctgaggca
ccgtcaccagacacgctgaaagacagtcaggcccagcggcagaaaatcagcagatgccag
gtctgcgtgaaggtgagctag
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integrated database retrieval system
