Sturnira hondurensis: 118975760
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Entry
118975760 CDS
T07222
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
shon
Sturnira hondurensis
Pathway
shon03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118975760 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shon04121
]
118975760 (SLX4)
03400 DNA repair and recombination proteins [BR:
shon03400
]
118975760 (SLX4)
Ubiquitin system [BR:
shon04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
118975760 (SLX4)
DNA repair and recombination proteins [BR:
shon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118975760 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
118975760
NCBI-ProteinID:
XP_036885753
LinkDB
All DBs
Position
Unknown
AA seq
1758 aa
AA seq
DB search
MMDESDDDFKELCASFFQRVKKNGSKEVSGERKTKKASNDTQITSRPKKAKPTATKSKTI
QGPRERKTRTGSQAARTKKQGAPKQQESEPAPPENGEGSMPASSVLRESAWSSQTEAAPN
SNSQPPPPCLTVMVPSPSKPRAAEVVLQRMQQFKRADPERLKHTSDGCSFQAALEENVPE
GPPEAMMVGNGSGPWLPATESDGAVALALQQEFRQEQASAHDDSLEAKGLFFCQICQKNL
SAMNVARREQHVNWCLDEAEKAMRPTAPQIPECPICGKPFLTPKSRISHVKKCAVKMEVG
PQLLLQAVRLQTAQPEGACGTLAQASSFSNHVGGLKRKGAPRKKEPQKRRKVSEPEVLSE
DLQVAMALSRSEMEQAAVPAVLTLGPAVSERKRLTTEKKSRKKKAPLSPPRLLVQDSETT
GRQIEDRVAQLFAGEEVALSSTPPLPASRLLKEELEKASRCLQPPEGKQNFLWEGSALTG
AWALESFYTASLVPPVAPQQSAKGLTQEPVPPQVSPDQPQPGVHMPPALHSTCPRNPPPS
ASQREYQALQDLMELAREGLSSSQLPSSGALVDSGESTGMDLPGGLPLTGFVLPAEEQHL
EMGGQASLSLGLLVADFSAMVNNPHLSDVQFQMDSGEVLYAHKFVLYARCPRLIQYVNSE
GFFAVEDGDLRTQRVLLSDVSTEATRAFLQYLYTADTGLPPQLAPELSSLACRFGVSELA
HLCKQASVVMDSEGRQWKEKEDEACESRAENFQELLRSIWVGEEEEAEALLKSEGLEEDK
EKVNEAEMEEIYEFAATQRKLLQEERAPEIEEETNQLGEDGPDSGQILASVQFNEQSENE
EQMESSGQGGDEAPAKRKSVGQSTFLPLKGQRSDGEEEAEAVKEALECTSSCSSSQGRPA
ERKEGSFLCSVDVNDYKQPFLSTPGGYPEPSQVTSDHKRGNGTIRERVGESSHPPTCQQE
PASYPCFVPSQPPPGRSPRQPHPRPHRTRDLSLPVPQSQGRASRAASQDSPSKQKRGQSL
LTLRNHPGCEKGKERGSLLEGRNKGVLISSEKSPSIDLTQAKPGHWSSISQNSPSSRNRE
DEIILLLDSDEEPEREQTKIKSVFNGSLEEGNVLEVSPKFSDLFSIIDVDADQEPSQSPP
RRDTPVQQEEGRLSRNQGYVGGKGTPPLFCSPKSSPDKDSTSDTSWLVPATPLAGRSRDY
SLQTQTLGLRSRMSGYEKAQLKPRAPLENRDGPRATSEFSVIVPHTSSSCPASVNPRSPS
SPSPRSHRHFSLLAPSPTSGARTDFSGQFLKHSLPRLGLLNQATASEVVEVEDSEDEQEL
ASCQASSSPVLDSGTPVPTVDCCWHAEPLSPIPIDSLNLERTGPLSTSSPGGRAGEALDS
GDCHSPALLGTTPIRGSGIGQRKSQEKSPQASSPGSSRLSFLNSRLWDDWDGEEQKSPEV
LSLAQTSRADGGQKSEGLEKPKGANRRKNLPPKVPITPMPRYSIMETPVLKKELDRFGVR
PLPKRQMVLKLKEIFQYTHQTLESDSEDESQFSQVPLEASCSQTHATKTTKGSKAAGCAR
PEAPSDPIPQRSKGPAKTKGTRHQKQQPGGSIPHMPPARVGPLGPDDDAQLPASQESTAT
SVDSSDSSLSSQSSSSEFGVAFESIGEDEEGEKGVSASQAVDVEEAVRCYIRSTPALYRK
VLLYQPFELSELQAELKQQGIRMATGKLLDFLDANCITFTTAAARKEKFERKKQQPMGKK
KRGRPQRPARGPLPSHGY
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagtcagatgatgattttaaggaactctgtgccagctttttccaaagggtg
aaaaagaacggctccaaggaagtatctggggaaaggaagacaaaaaaggcctcgaacgac
actcagataacaagcagacccaagaaagccaaaccaactgctaccaagagcaaaaccatt
caaggccctagggaaaggaagacccgaactggcagccaggctgcaaggacgaaaaaacaa
ggggcacccaagcagcaagagagtgaaccagctccccctgagaatggggaaggaagtatg
cctgcatcttctgtgctccgggagagtgcatggagctcccagacagaggctgctcctaac
agcaactcccagccccctcctccctgcctgactgtgatggtgccaagtccctccaagccg
cgggcggccgaggtggtcctgcaacgcatgcagcagttcaagagagcagaccccgagcgt
ttgaaacatacttcggatgggtgctccttccaggctgcacttgaagaaaatgtcccagag
ggccctccagaggcaatgatggtggggaacgggtctgggccctggctcccagccacagag
agcgacggtgcggtggccttggccctgcagcaggagtttcggcaggaacaagcctccgca
catgacgatagcctggaggcgaaggggttgttcttctgccagatctgtcaaaagaatctc
tcggctatgaacgtggcacggagggagcagcatgtgaactggtgcttggatgaggctgaa
aaggcaatgagacctactgcacctcagatccctgaatgcccaatttgtggcaagccattt
ctcaccccaaagagcagaatcagtcacgtgaaaaagtgtgcagtgaagatggaggttggc
ccccagctcctgctccaggctgttcggctgcagacagctcagcccgagggggcctgcggc
acactggcacaggcatcgagcttcagcaatcacgttggaggtctgaaaaggaagggagcc
cccaggaagaaggagccacagaagaggcggaaggtcagtgagcctgaggtgctatcagag
gacctgcaggtggccatggctctgtcccggtccgagatggagcaggcggctgtgcctgcg
gtgctcacactgggacctgctgtttctgagaggaaaagactgacaacagagaagaagagt
cgcaagaagaaagcacccctttctccaccccggttgttagtccaggactcggagaccaca
ggaagacagattgaggatcgtgtggcccagctctttgcgggagaagaagtagcgttgtcc
agtacgccaccacttcctgcaagcagacttttaaaggaagagctagaaaaggccagcagg
tgtctgcaaccacctgaagggaagcagaattttctgtgggagggcagtgccctgactggg
gcctgggccctggaatccttttacacggcaagcctggtgcctcccgtggcgccccagcag
tctgccaagggtctcacgcaggagcccgtgccgccgcaagtgtcacctgaccagccacag
ccaggtgtgcacatgccgcctgctctccacagcacctgtcccagaaacccgccaccctct
gccagccaaagggagtaccaggccctgcaggacctcatggagctggcaagagagggattg
agcagcagccagttgcccagtagtggagccctggttgactctggggagagcacagggatg
gatctgcccggtggccttccactgactgggtttgtcctgccagctgaggagcagcacttg
gaaatgggtggccaggcttcgctctcccttggtttgctggttgctgacttcagtgccatg
gtcaataacccgcacctgagtgacgttcagtttcagatggacagcggggaggtgctgtat
gcgcacaagtttgtgctttatgcccgatgccctcgtctcattcagtatgtgaacagtgaa
ggattcttcgctgtagaagatggtgacctaagaacccagcgcgtcctgctgagtgacgtg
agcacggaggctacccgtgcattcctgcagtatctctacactgcggacactggcctgcct
ccccagctggcccccgagctgagttccctggcctgcaggtttggcgtgagtgagcttgct
cacctgtgcaaacaagcatctgttgtgatggactcagagggcagacaatggaaggagaag
gaagatgaggcttgtgaaagcagagcagagaacttccaagaactcttaaggtcaatatgg
gtaggtgaagaggaggaagcagaagccttgttgaaatccgagggccttgaagaagataaa
gaaaaggttaatgaagcagaaatggaagaaatttatgaattcgcagctactcagcgaaag
ctgctccaggaggaaagagctccagagatcgaggaagaaactaaccagcttggagaagat
ggtccagattctgggcaaatcctagcaagcgtccagtttaatgaacagtcagaaaatgaa
gagcagatggaatcatctgggcagggaggagatgaggcccccgccaagaggaaaagtgtg
ggacagtccacattcctgccactcaagggccagcgttcagacggggaggaggaagcagag
gcagtgaaggaagccctggagtgtactagctcctgtagctcctctcagggccgcccagca
gagagaaaggaagggtcctttttgtgctcagttgatgtcaatgattataaacagcccttt
ttatcaactccaggaggataccctgagccatcccaagtaacaagtgatcacaagagaggc
aacggcactatcagagaaagggtgggggagagctcccatccccccacttgccagcaggaa
cctgcatcatatccgtgctttgtcccatcacagcctcctccaggcaggagtccccgccaa
ccacaccctcgcccccatcgcacaagagacttgtccctaccagtgccacaatcacagggc
agagcttccagggcagcctcccaggactcaccatcgaagcagaagaggggccagagcctt
ctcacgctacgtaaccatccaggctgtgagaaaggcaaagaacgtggttccctgctggag
ggcagaaataaaggagtcttgatctcatcagaaaagtctccatccattgacctaactcag
gcaaaacctggccattggagctccatatctcagaattctccatccagcaggaacagggaa
gatgagattatccttttattggattcagatgaagagccagagcgagaacaaaccaaaata
aagtcagtttttaatggctccctggaagaggggaatgttctagaagttagccccaagttc
tctgacctgttctccatcatcgacgttgatgcagatcaggaaccttcccaaagcccacca
aggagagacaccccagtacagcaggaggaggggcggctgtcgaggaaccagggctatgtg
ggtggcaaagggacccccccgctgttctgtagccccaagagcagccctgacaaggacagc
acctcggacacttcatggctggtgcctgccaccccacttgccggcagaagccgcgactac
tcattgcagacccaaaccttgggcctcaggtccaggatgtcaggatatgaaaaggctcag
ctcaagcccagagccccattagaaaacagagatggacccagagccactagtgagttttca
gtaattgtgccccacacatcgtcatcctgcccagcctctgtcaatcctagaagcccttct
agtccctcccccaggagccacagacacttttctctgcttgctccttctccaacctcggga
gcccgcactgatttcagtgggcagttcctgaagcactcgctgcctaggctgggcctgctg
aatcaggccacagcaagtgaagtggtggaggtggaagacagtgaagatgagcaggagctg
gcttcctgtcaggcgagcagcagccctgtgctggacagcggcacccccgttccaactgtt
gactgctgttggcatgccgagcctctctcaccaatcccaattgacagtttgaaccttgag
cggactggccccctgagtaccagtagcccaggcggtagggccggggaagccctggacagt
ggtgactgccactcccctgcactcctgggcaccacccccattcgaggaagtggcattggc
caaaggaagtctcaagagaaatcccctcaggccagttcccctgggagcagccggctgagc
ttcttgaattcacgcttgtgggacgattgggatggagaagaacagaagtctccagaggtt
ctttctctggcccagacatcgagagctgatggaggtcagaaatcagaagggttagagaag
ccaaaaggtgctaatcggaggaagaacttgccccccaaagtacccataacgccaatgcca
cggtattccatcatggagaccccggtactaaagaaggaactggataggtttggggtacgc
cctctgcccaaacgccagatggtcctgaaactgaaggaaatattccagtacactcaccag
acactggagtcagactccgaggatgagagccagttctcacaggtgcctctggaggcttct
tgcagccagacccatgccaccaaaaccaccaagggatccaaggcagcaggctgcgccaga
ccggaggccccttctgatcctattccccaaagatccaaggggccagccaagaccaagggc
acccgacaccaaaagcagcagcctggtggaagcatccctcacatgccaccagccagagtg
gggcctctaggccctgatgacgatgcccagctcccagcctcccaggagtccacggctacc
tctgtggacagcagcgacagttccttaagctcacagagttcttccagtgagtttggagtg
gcctttgagtctataggagaagatgaggagggcgagaagggggtcagtgcttcgcaggca
gtggacgtggaggaggcagtgaggtgctacatccgctccacaccagccctctaccgcaag
gtcctgctgtaccagccctttgagctgtcagagctgcaggcagagctgaagcagcagggc
atccgcatggccacggggaagctgctggatttcctggacgccaactgcatcaccttcacc
actgctgcggcccggaaggaaaagtttgagaggaagaagcagcagcccatgggcaagaag
aagaggggcagaccacagcgaccggcccgtggcccgctcccctcccatggctattag
DBGET
integrated database retrieval system
