Sturnira hondurensis: 118975979
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Entry
118975979 CDS
T07222
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
shon
Sturnira hondurensis
Pathway
shon03082
ATP-dependent chromatin remodeling
shon04714
Thermogenesis
shon05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118975979 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
118975979 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
118975979 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shon03021
]
118975979 (SMARCC2)
03036 Chromosome and associated proteins [BR:
shon03036
]
118975979 (SMARCC2)
Transcription machinery [BR:
shon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118975979 (SMARCC2)
Chromosome and associated proteins [BR:
shon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118975979 (SMARCC2)
PBAF complex
118975979 (SMARCC2)
GBAF(ncBAF) complex
118975979 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
118975979
NCBI-ProteinID:
XP_036886131
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKAPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKEPREGVGAVEEEAKEKTSEAPKKDDEKGKEGDSEKE
SEKSDGDPTVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALAPGSQPIPPTGAAGPPTVHGLAMA
PASVAPAPPGSGAPPGSLGPSEQIGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQT
PPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFGSLADSISINLPPPPNLH
GHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAV
QGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacaca
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaacaagtccttgtctagcctggttgtgcagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctctctctgccacatacttgcggctgcctacaaattc
aagagtgaccagggatggcggcgttacgacttccagaatccatcacgcatggaccgcaat
gtggaaatgttcatgaccattgagaagtccttggttcagaataattgcctgtctcgacca
aacatttttctgtgcccagaaattgaacccaaactactaggcaaactaaaggacattatc
aagagacaccagggaaccgtcactgaagataagaacaatgcttcccatgttgtgtatcct
gtcccagggaacttggaagaagaggaatgggtacgaccagtcatgaagagggataagcag
gttcttctgcactggggctatttccctgacagttacgacacgtggatcccagccagtgaa
attgaagcttccgtggaagatgctccaactcctgagaaacccaggaaggttcatgcaaag
tggatcctggacacagacaccttcaatgaatggatgaatgaggaagactatgaagtgaat
gatgacaaagcccctgtctctcgccgaaagaagatttcagccaagacattgacagatgag
gtgaacagcccagattcagatcgacgagacaaaaaggggggaaactataagaagaggaag
cgctccccctctccttcaccaacgccagaagctaagaagaaaaatgctaaaaaaggtccc
tcaacaccttacaccaagtccaagcgtggccacagagaagaggagcaagaagacctaaca
aaggacatggatgaaccctcaccagtccccaacgtagaagaggtgacattgcccaaaaca
gtcaacactaagaaggactcggagtcagccccagtcaaaggaggcaccatgactgacttg
gacgaacaggaggatgaaagcatggagaccacgggcaaggatgaggatgagaacagtacg
gggaacaagggggagcagaccaagaacccggacctgcacgaggacaatgtgacggagcag
acccaccacatcatcattcccagctacgcagcctggtttgactacaatagcgttcacgcc
attgagcgtagggctctcccagagttcttcaacggcaagaacaagtccaagactccagaa
atctacctggcctatcgaaacttcatgattgacacctaccgcctgaacccccaagagtat
ctcacctccaccgcctgccgcaggaacctggcgggtgacgtctgtgccatcatgagggta
catgccttcctagaacagtggggtctcattaactaccaggtggatgctgagagtcggcca
accccaatggggccaccacccacctctcacttccacgtcttggcggacacgccctcaggg
ctagtgcctctgcagcccaagaccccacagggccgccaggttgatgctgataccaaggct
gggcgcaagggcaaagagctggatgacctggtgccagagaccgctaagggcaagccagag
ctgcagacctctgcttcccagcaaatgctcaacttccctgacaaaggcaaagagaaacca
acagacatgcagaactttgggctacgcacagacatgtacacaaagaagaatgtcccctcc
aagagcaaagccgcggccagtgccactcgagagtggacagaacaggagactctgctgctc
ctggaggcactggaaatgtacaaagatgactggaacaaggtatcagagcatgtggggagc
cgcacccaggacgagtgcatcttgcattttctccgtcttcccatcgaagacccgtacctg
gaagactcagaggcctctctgggccccctggcctaccagcccatccccttcagtcagtca
ggcaaccctgtgatgagcactgttgctttcctggcctccgtcgtcgatcctcgagttgct
tctgctgctgcgaagtcagctctagaggagttctccaaaatgaaggaagaggtgcccaca
gccttggtggaagcccacgttcggaaggtggaagaagcagccaaagtgacaggcaaggca
gaccctgccttcggtttggaaagtagcggtattgccggaaccacctctgatgagcctgaa
cggattgaggagagcgggactgacgaggcgcgggcggagggccaggccacagaggagaag
aaggagcccaaggaaccccgagaaggagtcggggctgtagaggaagaagcaaaggagaag
accagcgaggctcccaaaaaggatgatgagaaagggaaagaaggtgacagtgagaaggag
tcagagaagagtgatggggaccccacagttgaccctgagaaggagaaggaaccaaaggag
gggcaggaggaagtgctgaaggaagtggtggagtcggagggggaaaggaagaccaaggtg
gagagggacatcggtgagggcaatctctccaccgctgccgctgccgcgctggctgccgct
gccgtgaaggccaagcacttggctgccgttgaggagaggaagatcaagtctctggtggcc
ctgctggtggagactcaaatgaaaaagttggagatcaaacttcggcactttgaggaactg
gagacgatcatggaccgggaacgagaagcactggagtatcagaggcagcagctcctggcc
gacaggcaagccttccacatggagcagctgaagtatgcggagatgagggctcggcagcag
cacttccaacagatgcaccaacagcagcagcagccaccaccagccttggccccgggctcc
cagcctatcccacctacaggcgctgctgggccacccacggtccatggtttggctatggct
ccggcctctgtggctcctgcccctcctggcagtggggcccctcctggaagcttgggcccc
tctgaacagattgggccacagcagcagcaaccagctggagccccgcagccgggggctgtc
ccaccaggggtaccaccccctggaccccatggcccctcaccgttccccaaccaacaaact
cctccctcaatgatgccaggggcagtgccaggcagcgggcacccaggcgtggcgggtaat
gctcctttgggtttgccttttggcatgccgcctcctcctcctcctgctccatccatcatc
ccatttggtagtctagctgactccatcagtattaaccttccccctcctcctaacctgcat
gggcatcaccaccatctcccattcgccccgggcactctccccccacctaacctgcctgtg
tccatggcgaaccctctacatcctaacctgccggcgaccaccaccatgccatcttccttg
cctctcgggccggggctcggatccgccgcagcccagagccctgccattgtggcagctgtt
cagggcaacctcctgcccagtgccagcccactgccagacccaggcacccccctgcctcca
gaccccacggccccaagcccaggcacagtcacccctgtgccacctccacagtga
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integrated database retrieval system
