Sturnira hondurensis: 118976367
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Entry
118976367 CDS
T07222
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shon03036
]
118976367 (TDRD12)
Enzymes [BR:
shon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
118976367 (TDRD12)
Chromosome and associated proteins [BR:
shon03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118976367 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
118976367
NCBI-ProteinID:
XP_036886714
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MLEVVVLKIEDPGCFWGIVKGCSPFLDHEADYQKLNRAMNDFYNALSQDIEIKPLMLEEG
QVCVVYCQQLRCWCRAVIKSIVSSADHYLAECFLVDFAKYIPVKLKNVRVAVETFMQLPY
RAKKFRLYGTKPVTLHVDFCEDSAKIVRAKKWDAAAVQYFQNILKATTQVEAKLCAVEED
TFEVYLYVTIKNEKVCVNDDLVAKNFACYVSPVENKNLDSSEKPGLNIKSASFPNKLNPA
LALWPMFLQGNDSQGIETIKCKMDSLSGSPTKKSEEKQQCISLKDVNQGVESSIYWPVKR
GVTIYADPDIPAPSALREKSDEKPLRLAEKKEHNEKNGCVKLLQFLNPDSLRTDGISDLQ
QLQKLRAGTQPPSAVLRNRVEPCLSLGVAPLSAGLKKALQRNKFLGPSHTESYSWPPIAR
GCDVVVVSQCGNDPLLYLPPVLTILQTGGCYKSLPSRNGPLAVIVCPGWRKAQFVFELLG
EYSVSSRPLHPMVLTIGLHKDEAKNVKLPRGCDVIVTTPHSLLRLLKHQSLLFLRLCHLV
LDEVEVLLSEANEQVFAILDNFKKNTEVEERESAPRQVVACGVRWSKHLERVIRQFMAEP
YVVVTAMEEAALCGNVQQVVHLCLESEKTSTLLQTLDFIPSQAQKTLIFTCTVAEAETVC
KVVESCSVFCLKMHKEMVFDLKSVLEQWNKKLSSGSHIVLALTDDCTPLLAITDATCVIH
FSFPASPRIFGERLYCMSDHFQSLTEQGSPAKQGDTKPRSVLLLTERSAGRAVGVLRYLE
RADARIPSELYQFTAGVLEAKEGEKARRPLCPCLKAFGFCKDKRICPDRHHVNPEIDMPR
KLSDQAIPTFGYIKIIPFYIVNATNYFGRILDKHVDLYATLNAEMKEYFEDASNKTTVEQ
VEKFGLYGLAEKTLFYRVQVLEMGQEEDHWALGKILVKFIDEGRTGLVARDQLLHLPESL
RPLPPQAVEFVVCRVKPADGEIEWNPKVTRYIHHKIIGKLHDAKVVLALGNTVWIDPMVH
ITKLLNLKTSVIDYNVRGEILSMGMGVDNSEHIEQLKKLYEGAKMPAVEESLSQTLGPLS
EDAAGLRSTQQADGDEDADGGSERRADSETDTENQKHETSPENTSDASINKTTEPLKSFH
PQIQWFQKGDLVILRMRIRDVRDYKCKYFRDRVIFSAWVGEKFYLADLELQANIIKEDCK
CVIKNDEPVITLAKERREPWRSLLRQRNPNVAFDFDHWEECEEESHFSKVVHTKNLSCKV
AEVTEDSDQTSEDDGSESE
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtagtggtgctgaagattgaggatccaggttgcttttgggggattgtaaaa
gggtgtagtccctttttagatcatgaagctgactatcaaaaacttaatagagccatgaat
gacttctataatgccctgagtcaagacatcgaaataaaaccattaatgttggaggaaggg
caggtgtgtgtggtttactgtcagcagctcaggtgctggtgccgggctgtgattaagtcg
atcgtgtcctcagcagaccattacctggcagagtgtttccttgtggattttgccaagtac
attccagtgaaattgaaaaatgtccgagtggcagtggaaacttttatgcagcttccctat
agggcgaaaaaattcagactgtatggcacaaagcctgtgacgctacatgttgacttctgc
gaagacagtgctaagattgtacgcgccaagaagtgggatgctgcagctgttcagtacttc
cagaacattctaaaagcaacgacccaggtggaagccaaattatgtgctgtggaagaagat
acttttgaggtttacctgtatgtaactataaaaaatgaaaaagtttgtgttaatgatgat
ctggttgcaaagaacttcgcctgttatgtgtcacccgtggagaataaaaaccttgattct
tcagagaaaccaggcttgaatataaagtcagcgtcctttcccaataaactcaacccggca
cttgctctttggccaatgtttttgcaaggaaatgactctcaaggaattgaaactataaaa
tgtaaaatggattccttgagtggttcacctacaaaaaaatctgaagagaaacaacagtgc
atctctttaaaagatgtaaatcagggtgttgaatcttccatatactggccagtgaaaaga
ggcgtaaccatatatgctgatccagatataccagcacccagtgctttacgtgagaagtca
gatgagaaaccgcttagactggctgagaagaaagaacacaatgagaagaacggctgtgtg
aaattattgcaatttttaaatcctgattctctgagaactgacggaatctctgatctgcaa
cagttgcagaagctgcgggcgggcacgcagccgccctctgctgtgctgcggaacagggtg
gagccttgcctctccctcggcgtggcaccactgtcggctggcctgaaaaaggctcttcaa
agaaataagtttctgggacctagccacactgaatcttactcttggcctcccatagcacgt
ggctgtgacgtggttgtcgtttctcagtgtggaaacgaccctttgttgtaccttccacca
gtgcttacgattttgcagactgggggctgctacaagtcattaccaagtagaaacggacct
ctggcagtcatcgtgtgtcctgggtggagaaaggcccaatttgtttttgaattattggga
gagtatagtgtgtcctccaggcctcttcatcctatggtgttaaccattgggctccacaaa
gacgaagccaaaaatgtgaagcttccaaggggttgtgatgtaattgttacgacaccacat
agcctcttgagacttctcaaacatcagagcctgttgtttcttagactctgccacctggtt
ttggacgaggtggaagtattgctgtctgaagctaatgaacaagtgtttgctatactagac
aactttaaaaaaaataccgaagttgaagagagggaatccgcgccacgccaggttgttgca
tgtggggttcgctggagcaagcacctagagcgtgtcatcaggcagttcatggccgagccc
tacgttgtcgtcaccgccatggaggaggctgcgctctgcggcaacgtccagcaggttgta
catctttgcctggaaagtgaaaagacttctactttactccagactcttgatttcatcccc
agtcaggcacagaagactttgatctttacctgtactgtagccgaagctgaaacagtgtgt
aaggtagtagaaagctgttcagtattttgcttgaaaatgcataaagaaatggtttttgat
ttaaaaagtgtattagaacaatggaacaagaagttaagttctggctctcacattgtatta
gccctgaccgacgactgcacacccctcttggccatcaccgatgccacgtgtgtcattcac
ttcagcttccctgcctcgcccagaatttttggtgaacgcctgtattgcatgtctgatcat
tttcagagtttaactgaacagggttctcctgccaaacagggagacacaaaacccagatct
gtcttgctgctgacggagaggagtgcaggccgtgctgttggagtcctgcgctacttggag
agagcggatgccaggatcccgtcggagctgtatcagtttaccgcaggggttctcgaagcg
aaggaaggggaaaaagccaggaggcctctttgtccatgtcttaaggcttttggattttgc
aaagacaaaaggatttgtcctgatcgacaccatgttaatccagaaatagacatgccaagg
aaattatctgaccaggctataccaacattcggatacattaaaataatacccttttatatt
gtgaatgcgacaaattactttggtcgtatacttgacaaacatgtggatctttatgcaact
cttaatgctgaaatgaaggagtattttgaggatgccagtaataaaactactgtcgaacag
gtggagaaatttggactatatggattagcagaaaaaacacttttttacagagtccaagtg
ctggagatgggccaggaagaagaccactgggccctgggtaaaatcctggtgaagtttata
gatgaaggcaggactggcctcgtggccagagatcagctgctgcatctcccggaaagtctc
cgccccctgcccccccaggcagtggagttcgttgtttgtagagtgaaacctgccgatggt
gaaattgaatggaatccaaaggttactaggtacattcatcacaaaattattggaaaattg
catgatgcaaaagtggtattggctttaggaaatacagtttggattgatccaatggtgcac
atcacgaaacttttaaatttgaaaacttctgtcattgattacaatgttcgaggtgaaatt
ttgtcaatgggaatgggtgttgacaattcagaacatatagaacaactgaagaaattgtac
gaaggagctaaaatgccagctgttgaagaaagtctaagccagaccctagggcctctgtcg
gaagacgctgcaggtctgcgaagcacacagcaggcggatggggacgaggatgcagacggg
ggctcagaaagacgtgctgattcggagacagacacagaaaaccaaaagcatgaaacttca
cccgaaaacaccagcgatgcttccattaacaaaaccacagagcccctgaaaagcttccac
ccacagatacagtggttccagaaaggcgacctggtcatactgaggatgcggataagggat
gtgagagactacaaatgcaagtattttagagatcgagtcattttcagtgcctgggtagga
gagaagttttacttggccgatttggagctgcaggccaacataataaaagaggattgcaag
tgtgtgattaaaaatgacgaacctgtgatcacccttgcgaaagagaggagggaaccctgg
cgcagcttactcagacagaggaatcctaatgtggcttttgattttgaccactgggaagaa
tgtgaagaggagagccacttctccaaggttgtacacactaaaaacctgtcctgcaaagtg
gcagaggtgactgaggacagtgaccaaacttccgaggatgacggaagtgagagcgaatga
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