Sturnira hondurensis: 118976568
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Entry
118976568 CDS
T07222
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shon03019
]
118976568 (NRDE2)
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118976568 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
TPR_12
Motif
Other DBs
NCBI-GeneID:
118976568
NCBI-ProteinID:
XP_036886984
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MALFPAFAGVSEAPDSGSSRKELDWLSNPSFCVGTITTPSQRTEEATALVSEGSPLTRSP
VKSDPSDDSDANRKLRHSGRKKKREKKRKRKHQHHEKTRRRHGQPGGSASASASDAGSDR
DGSSRGSRDGKRESEKPSQEHSAAAHIGRRCVWLEDLQALTEETFRTDTKPDPANWEYKS
LYRGDIARYKRKGDSCLGINPKKQRISWEGASAAKKHSHRRVERYFTKKNVGLMNADGVA
VGSKTGPASSEPVSFIPVKGADDVAPPVTTWLNPLGIYDQSTTQWLQGQGPSEQESKQPD
PEPDREDALLKAKVEEFNRRVRENPRDIQLWMAFVAFQDEVMKSPGLYAIEEGGQEKRKR
SLKLILEKKLAILERAIESNQSSVDLKLAKLQLCAEFWEPPTLLKEWQKLIFLHPNNTAL
WQKYLLFCQSQFSTFSVSKIHSLYGKCLSTLSAVKDGSILSHPELPGTEEAMFALFLQQC
HFLRQAGHSEKAVSLLQAMVDFTFFKPDSVEGLPTKGQVEFFEPFWDSGEPRAGEKGARG
WRAWMHQQERGGWVVVTPDDDDDEPEDDDQEIRDKTLPRWRIWLAAERARDQKHWRPWRP
DKTKKQTEDDCEDPERQVLFDDIGQSLIRLSSQELRFQLIAAFLQFLGVPSGFSPPAACL
YLAMDENSIFDHGLCDEKPLTFLNLSFSGVSCVGRTDQLGCRRWTRGHNREGEEFIRNVF
HLVMPLFSGRERSQLCFSWLRYEIAKVIWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENR
NDFCLWKQYAHLEWLLGNTEDARKVFDTALSIAGSGELRDHEVCELSLLYAELELELAPD
PRGAARARALHILTRLAENSPYGPYTGQVPAVHILKARKAYERALQDCLGETRVSDPPGT
DSLDRLVSVVKCFMLFQYLTVGIDAAVQIYEQVFAKLKGAVSPEGPGPEHSASARSVSNA
LEAVTLMHTSLLRFHMKVSVYPLAPLRQALSEALKLYPGNQVLWRSYVQIQNQSHNASKT
RRFFDAVARNAEPLEPWLFAIEAEKMRKRLVETVQRVDGRELHATIPETGLTHRIRALLE
NATRSDHGSHCPLLWRMYLNFLVSLGNKDRSKGVFYKALQNCPWAKVLYMDAVEYFPDEM
QEVLDLMTEKELRVRLPVEELELLLED
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccggcctttgcgggtgttagcgaggctcccgatagcgggagctccagg
aaagaattagattggctgagcaacccaagcttttgtgttgggaccataacaactccgagc
caacgaactgaagaggccacagcgcttgtttctgaggggtcaccgctgacgaggagccct
gtgaaatcagacccttcagatgacagtgatgcgaacaggaagctcagacactccggcaga
aagaagaagagagagaagaagaggaaaaggaagcatcagcaccacgagaaaaccaggaga
cgccatgggcagccaggtggcagcgcgtctgcgtctgcatcggacgccggttctgaccgg
gacgggtcttccagaggcagcagagacggcaaaagagaatcggagaagccaagtcaagaa
cacagtgctgctgcgcacatcggacgtcgctgcgtctggctggaggacctccaggctctg
acggaagaaaccttcagaacagatacgaaaccagaccctgcaaactgggagtataagtcc
ctgtaccgaggagacatagccaggtacaagaggaaaggagactcctgccttggcattaac
cctaagaagcagcgcatatcctgggagggggcttctgcggcgaagaagcactcacacagg
cgtgtcgagcgctacttcacgaagaagaacgtggggctgatgaacgctgacggggttgcc
gtcggcagcaagactggacctgcctcgtccgagccagtgtccttcatcccggtgaagggt
gcggatgatgtggctcctcccgttacaacctggctgaaccctctggggatttatgatcag
tccaccacgcagtggctgcaaggacagggtccttcagagcaggaatcaaagcagccagac
ccagagccagaccgagaggacgcgcttctcaaggccaaggtggaagagtttaacaggagg
gtgcgagagaatcctcgggatattcagctgtggatggcctttgttgcttttcaggacgag
gtcatgaaaagccccggcctatatgccatcgaggaaggagggcaggagaagcggaagagg
tccctgaagctcattctggagaagaagctggccattctggagcgagccatcgagagcaac
cagagcagcgtggacctgaagctggccaagctgcagctctgcgcggagttctgggagccc
cccacgctgctcaaagagtggcagaagctgatcttcctacaccccaacaacaccgccctt
tggcagaaataccttctgttttgccagagccagttcagcaccttttcggtatcaaaaatt
catagtctttatggaaaatgcctgagtactttgtcggccgtgaaggatggcagcatcctg
tctcaccccgagctgcctggcaccgaggaggccatgtttgccctcttcctgcagcagtgc
cacttcctgcgccaggccggccactccgagaaggccgtctctctgctccaggccatggtg
gacttcaccttcttcaaacccgacagcgtggagggcctgcccaccaaaggacaggtagaa
ttcttcgagcccttctgggacagcggagagccgagggcgggggagaagggcgcccgaggc
tggagggcctggatgcaccagcaggagcggggcggctgggtggtcgtcactccagacgat
gacgacgatgaaccggaagacgatgaccaggaaatcagagataagactctgcccaggtgg
cggatctggctggccgctgagcgggcccgagaccagaagcactggcggccgtggcgccct
gacaagaccaagaagcaaactgaggacgactgtgaggacccagagagacaggtgttgttt
gacgacatcggacagtctctgatccgactttccagccaagaacttcggttccagctgatc
gcggccttcctgcagttcctgggcgtgccttctggcttcagccctcccgccgcctgcctt
tacctggccatggacgagaacagcatcttcgatcacggactttgtgatgaaaagccgttg
acttttctcaacctttcattttccggcgtgagctgtgttggccgcacggaccagttgggc
tgccggcgctggaccagaggtcacaaccgagagggcgaggagttcatccgcaacgtcttc
cacctggtgatgccgctgttctcaggcagagagcggtctcagctctgcttctcctggtta
cgatacgagattgcaaaggtcatttggtgtcttcacactaaaaacaagaagagattaaag
tcacaaggaaagaactgcaaaaaactagccaagaatctccttaaggagccagaaaatcgc
aacgatttttgcctctggaagcagtatgcacatctggagtggttgctcggcaacacagag
gacgccagaaaagtttttgatacggcactcagcatagcagggagcggagaactgagggac
catgaggtctgtgagctcagtctgctctacgctgagctggagctggagctggcaccagac
ccgagaggggccgccagggcccgagctcttcacatattaaccaggctggctgagaacagt
ccctatgggccctacactgggcaagtcccagccgttcacattctgaaagctcggaaggct
tacgaacgtgcgctgcaggactgcttgggtgagacccgcgtctctgatccacctggcacc
gattcccttgaccgccttgttagcgtggttaaatgctttatgctcttccagtatttgact
gtggggattgacgccgctgtgcagatatacgagcaagtgtttgcgaaactgaagggcgct
gtttccccagaaggcccaggccccgagcacagcgccagcgccaggagcgtgagcaatgct
ctcgaggccgtcacgctgatgcacacgagcctgctcaggttccacatgaaagtcagtgtc
taccccctggcccctctgcggcaggcgctctcggaggccttgaagttgtatccgggcaac
caggttctttggaggtcgtatgtgcagattcagaaccagtcccacaatgccagtaagacc
agaagattcttcgatgcagtcgccaggaatgcagaacccctggagccatggctgtttgcg
attgaagctgagaaaatgaggaaaagactggtggagacggttcagagggtagatggcaga
gagctgcacgccacaattcccgagaccggcttgacgcaccggatcagagccctgttggaa
aacgcgacccggagtgaccacggcagccactgccccttactgtggaggatgtatttgaat
ttcttggtgtccttaggaaataaggacaggagcaaaggtgtcttctacaaggcgctccag
aattgtccttgggcaaaggtgttgtacatggacgctgtggagtacttccccgatgagatg
caggaggtcctggacctgatgacggagaaggagctccgggtgcgcctgcctgtggaggag
ctggagcttctgcttgaggactag
DBGET
integrated database retrieval system