Sturnira hondurensis: 118977271
Help
Entry
118977271 CDS
T07222
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shon03041
]
118977271 (YTHDC2)
Enzymes [BR:
shon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118977271 (YTHDC2)
Spliceosome [BR:
shon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118977271 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
Helicase_C
R3H
DEAD
HA2_N
Ank_2
AAA_19
nSTAND3
AAA_22
Ank
ATPase
PhoH
AAA_7
UvrD-helicase
AAA_16
AAA_29
T2SSE
SRP54
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
118977271
NCBI-ProteinID:
XP_036888054
LinkDB
All DBs
Position
Unknown
AA seq
1431 aa
AA seq
DB search
MSRPSSVSPRPPAPGGGCGGGGGGPAQCGPGGGARAKGLRDVRIDEEVKIAVNIALERFR
YGDQKEMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTC
NLTHNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQI
PVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN
GIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLL
RTLMAGDSTLSAVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFI
RYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSA
QENTSKSESQRQRTVPNVTEEYDILDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIW
LHKDVEAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGANVHCKA
SNGWMALDWAKHFGQNEVVDLLESYSASLEFGNLDESSLVQKSGSDLSAEDRELLKAYHH
SFDDEKVDLDLIMHLLYNVCHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADSIHRYQ
VFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDAL
NFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELC
LHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPV
EPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDH
MALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGD
IRDVNTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPTSVLSQPQYKKI
PPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSVVTPVTVLVFCGPARLASNALQES
SSFRADGIPIDSSDSEMEDRTTANLASLKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRR
MRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNN
SRKSSADTEFSDEPATAERVLMKSPSPALHPPQKYKDRGILHPKRSTDDRSDQTSVKSAE
DYPSPCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLEISQQKGIWSTTPSNERK
LNRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKESL
PFQFAHHLLNPWNDNKKVQISRDGQELEPQIGEQLLQLWERLPTGEKTTTD
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcctagcagcgtctccccgcggccgccagctccgggcggcggctgcggtggc
ggcggcggcggcccggctcagtgtggccctgggggcggcgcccgggccaaggggctaagg
gacgtgcgcatagacgaggaggtgaagatcgcagtcaatatcgctctggagcgcttccgc
tatggggaccagaaagaaatggaatttccttcttctttgaccagcactgaacgagccttt
attcatcgactgagtcagtctcttggtttggtctctaaaagcaaaggaaagggagcaaat
agatacctaactgtgaagaagaaagatggatcagaaacagcgcatgcaatgatgacctgt
aatttgactcataatacaaaacatgctgttaggagtctaattcaaagatttcctgtcacc
aataaagaacgtactgaacttctgcctaaaacagaaagaggaaatgtgtttgcagttgaa
gctgaaaaccgggaaatgagcaagacaagtgggcgactcaacaatggcatacctcagatt
ccagtgaaaagaggagaatccgaatttgattctttcaggcagtctctgccagtgtttgaa
aaacaggaagaaattgttaaaataattaaggaaaataaagtagttttgattgtaggagaa
actgggtctggaaagactacacagattcctcagttcctgttagatgattgctttaaaaat
ggtatcccctgccgtatattttgtactcagccaagacgattagcggctattgctgtggct
gaaagagttgctgcggagagaagggaaaggattggtcaaacaattgggtatcagatacga
ttagaaagcagggtttctccaaagacacttctgacattttgcaccaatggggtattgctt
cgtaccttgatggcaggagatagtacattgtcagctgtgacacatgttattgtggatgaa
gtacatgaaagggatcgatttagtgattttttacttacaaagttaagagatttgttgcaa
aagcacccaactttgaaactaattctttctagtgctgccttggatgtaaatctctttata
agatattttggaagttgtccagtgatatatatacaaggaagaccatttgaagtaaaagaa
atgtttctggaagatattttaagaactactggatatacaaacaaagaaatgttaaaatac
aaaaaggaaaaacagcgagaagagaaacagcaaaccacacttacagaatggtattcagcc
caagagaatacttcaaagtctgaatctcagaggcagagaactgttccgaatgtgactgaa
gagtacgacatactggatgatggtggtgatgctgttttcagtcagttgacagaaaaagat
gtgaattgccttgaaccatggttaataaaggaaatggatgcttgtctttctgacatatgg
ttgcataaagatgttgaagcttttgctcaggtttttcatcttattttaactgaaaatgtt
agtgtggactacagacatagtgagaccagtgcaacggctctgatggttgctgcgggacgt
ggcttttcaagccaagtagagcagttgattagtatgggagccaatgtccattgcaaagca
tcaaatggctggatggctttagattgggctaaacactttgggcagaatgaagttgtggat
cttttagaatcttacagtgcttcattggaatttggaaatctagatgaaagttctctggtt
caaaaaagtggaagtgacctcagtgcagaagatagagagctcctgaaagcttatcaccat
agttttgatgatgaaaaagtagacttggatttgatcatgcatcttctatacaatgtctgc
catagttgtgatgctggtgcaatactaattttcctccctggatatgatgaaattgtggga
ttgagggatcgcatcctatttgatgacaagcggtttgctgacagtatacacagatatcaa
gtctttatgcttcattcaaatatgcaaacatctgatcaaaagaaagtattaaaaaaccca
cctgcaggtgttcgaaaaataatcctttccaccaatattgctgaaaccagcatcacggtc
aatgatgttgtctttgtcattgattctggtaaggttaaagagaaatcctttgatgcgctg
aattttgttacaatgctaaaaatggtgtggatttccaaagctagtgcaatacaacgaaaa
ggcagggcagggcgatgtagacctggaatttgcttccgtctattcagtagactccgattc
cagaatatgttggaatttcagactccagaacttttgagaatgccattacaggaactttgt
ttacataccaagctgttagccccagttaattgtcctattgctgattttcttatgaaagca
ccagaacctccaccagctttaattgtaagaaatgctgtacaaatgcttaagacaatagat
gcaatggatgcgtgggaagatctcactgaacttggatatcatttggctgacttgccagta
gaaccacatcttggtaaaatggtcctgtgtgctgttgttttaaagtgtctggaccccatc
cttacaattgcctgcacgctagcctatcgagatccttttgtcctgccaacgcaggcctct
cagaaacgtgcagctatgctctgtaggaaacgattcactgcaggaactttcagtgatcac
atggcacttctcagggcattccaggcatggcagaaagcacggagtgatggatgggagaga
gccttttgtgaaaagaattttctttcacaagctactatggaaataataataggcatgaga
actcaattgcttggtcaacttagagcatcaggttttgttagagcacgaggtggtggtgac
attcgagatgttaacacaaattctgagaattgggctgttgttaaagctgcattggtggca
ggcatgtatcctaatttagtccatgtggacagagagaatttagtgttgacagggccaaag
gagaaaaaagtacggtttcatcccacgtcagttctcagtcagcctcaatataaaaagatt
cctccagccaatggtcaagctgcagcaattcaggcactgcccacagattggcttatttat
gatgaaatgaccagagcccatagaatagctaacatcagatgctgttcagtagtgacacct
gtcacagtattggtattctgtggtccagccaggttggcaagtaatgctcttcaggaatct
tcatcctttcgagcagatggtattcctattgacagtagtgatagtgaaatggaagataga
actactgctaatttggcatctttgaaacttgatgagtggctgaatttcaaactagagcct
gaggctgccagtttattgctgcagctcagacagaagtggcacagcttatttttacgccga
atgagagctccatctaaaccttggtctcaagttgatgaagctaccatcagagcaattata
gctgttttaagcactgaagaacagtctgcaggtttacagcaaccatctgggattggccaa
aggccaaggcctatgtcttcagaagaacttcctttggcatcatcttggaggtcaaataat
agtcggaaaagttcagcagatactgaattttctgatgagcctgctactgcagaaagagtg
ttgatgaaatctccatctccagcattacacccacctcagaagtacaaagatagaggaatc
ttacatcctaaacgaagcactgatgaccgatcagatcagacttctgtaaagtctgcagaa
gattacccaagtccgtgtgctagtccttctcctccatcctcaggaaaggggtcaaaatca
ccttcaccaagaccaaacatgccaattcgatacttcataatgaagagtagcaatttgaga
aaccttgaaatttctcaacagaagggtatttggtctacaactcctagtaatgaacggaag
ttaaatcgagccttttgggaaagcagtatggtttacttggtattttctgttcaaggatct
ggacatttccagggattttctaggatgtcttctgagataggaagggagaagagccaggac
tggggctccgctgggctaggaggcgtgttcaaggtggagtggatacgaaaggaaagcctt
cccttccagttcgcacatcatttactcaatccttggaatgacaacaagaaagtccagata
agcagagatgggcaggaactagaacctcagattggggaacagctgctacagttatgggaa
cgccttccaacgggagaaaaaaccacaactgattga
DBGET
integrated database retrieval system
