Sturnira hondurensis: 118977788
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Entry
118977788 CDS
T07222
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
shon
Sturnira hondurensis
Pathway
shon03082
ATP-dependent chromatin remodeling
shon04714
Thermogenesis
shon05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118977788 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
118977788 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
118977788 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shon03000
]
118977788 (ARID1A)
03021 Transcription machinery [BR:
shon03021
]
118977788 (ARID1A)
03036 Chromosome and associated proteins [BR:
shon03036
]
118977788 (ARID1A)
Transcription factors [BR:
shon03000
]
Eukaryotic type
Helix-turn-helix
ARID
118977788 (ARID1A)
Transcription machinery [BR:
shon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118977788 (ARID1A)
Chromosome and associated proteins [BR:
shon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118977788 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
118977788
NCBI-ProteinID:
XP_036888776
LinkDB
All DBs
Position
Unknown
AA seq
2280 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQQQREEAGGEAAAAAAERGEMKAAAGQESEG
PTVGPPQPLGKELQDGAESNGGGGGAGGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGG
GGNSSSSSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPA
LAALQSGGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGNTP
GSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGSSAAGGGTPQPTATPTLNQLL
TSPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAVASGGAQQRSHHAP
MSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQP
YGSQTPQRYPMSMQSRAQSTMGGLSYAQQIPPYGQQGPGAYGQQGQTPYYNQQSPHPQQQ
QPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSAQPPYSQQSAQPPHQQSPTPYPSQQSTT
QQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQ
ELSQDSFGSQASSTPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGV
STSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPVAVPG
NQMPPRPPSGQSDSIIHPSMNPSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQM
HTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGGQM
HGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAM
HVAANSIQNRPPGYPNMNQGGIMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSAGM
AASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERK
MWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLN
VGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSM
QGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGGDPTFQK
RNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYS
RAAGPGLANVAMGPRQHYPYGGPYDRVRTEPGMGPEGNMGTGAPQPNLMPSNPDSGMYSP
SRYPPQQQQQQQRHDSYGNQFTQGTPSSSPFPSQQTTMYQQQQQNYKRPMDSTYGPTAKR
HEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATAAAAT
ERRPASGPQNQFPFQFGRDRVSAPPGSSAQQNIPPQMMGGPIQASAEVAQQGTMWQGRND
MTYNYTNRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSAPVPT
MTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHTGMKMQKAGPPVPAS
HIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAE
STWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRT
LLDPGRFSKASSPAPVEGEDEEDFLGPKLEEEEEEIVENDEEMAFSGKDKAASENSEEKL
TSKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTEL
LPTQPHMPCLPVTRKHVIAGECTQGTTEQEGPPPDGPPEKRITATMDDMLSTRSSTLTEE
GAKSTEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVS
NTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNK
VEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFST
LGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCRE
MAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEP
TSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6843 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcagcagcgggaggaggcggggggcgaggcg
gcggcggcagcggccgagcgcggggaaatgaaggcagccgccggccaggaaagcgagggc
cccaccgtggggccgccgcagccactgggaaaggagctgcaggacggggccgagagcaat
gggggtggcggcggagccggcggcggcgggcccggtgcggagccggaccttaagaactcg
aacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgcccggtggc
ggcggcaacagcagcagcagcagcagcgatggggtgggggcgcctcctcactcagccgcg
gccgccttgccgcccccagcttacggcttcgggcaaccctacggccggagcccgtctgcc
gtcgccgccgcggcggccgccgtcttccaccaacaacatggcggacaacaaagccctgcc
ctggcagcgctgcagagcggcggcggcggcgggggcctggagccctacgcggggccccag
cagaactcgcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgc
agcgcctaccccccacctccccaggcctacgcgctgagctccccgagaggtaacactccg
ggctccggcgcggcggcggccgccggctccaagccgcctccatcctccagcgcctccgcc
tcctcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggctcc
tcagcggccggcgggggaaccccccagcccaccgccacccccaccctcaaccaactgctc
acgtcgcccagttcggcccggggctaccagggctaccctgggggcgactacggcggcggg
ccccaggacgggggcgccggcaagggcccggcggacatggcctcgcagtgctggggggct
gctgcggcggcggcggcagtcgcctcgggaggggcccaacaaaggagccaccacgcgccc
atgagccccgggagcagcggcggcggggggcagccgctcgcccggacccctcagccatcc
agtccaatggatcagatgggcaagatgagacctcagccatatggtggaactaacccatac
tcgcaacaacagggacctccatcaggaccgcagcaagggcatgggtacccagggcagcca
tatgggtcccagactccccagcggtacccgatgagcatgcagagccgggcgcagagtacc
atgggcgggctctcttatgcacagcagattcctccttacggacaacaaggtcccggcgca
tatggtcagcagggccagactccgtattacaaccagcaaagtcctcacccccagcagcag
cagccaccctattcccagcaacctccatctcagacccctcatgcccaaccttcatatcag
cagcagccacagtctcagccaccacagctccagtctgctcagcctccatattcccagcag
tcagcccagcctccacatcagcagtctccaactccatacccctcccaacagtctacaacc
cagcagcatccccagagccagcccccctactcacagccacaggcacagtctccctaccag
cagcagcaacctcagcagccagcttcctcaacgctctcccagcaggctgcataccctcag
ccccagtctcagcagtcacagcaaactgcctattcccagcagcgcttccctccaccacag
gagttatctcaagattcatttgggtctcaggcatcctcaaccccctcaatgacctccagt
aagggagggcaagaagatatgaacctgagtcttcagtcaagaccctcgagcttgcctgat
ctgtctggttcaatagacgatctccccatggggacagaaggagctctgagccctggagtg
agcacatcagggatttccagcagccaaggagaacagagtaatccagctcagtctcctttc
tctcctcatacttcccctcacctgcctggcatccgaggcccttccccatcccctgttggc
tctcccgccagtgttgctcagtctcgctcaggaccactctcgcctgttgcagtgccaggc
aatcagatgccacctcggccacccagtggccagtcggacagcatcatacatccttccatg
aacccatcaagcattgcccaagatcgaggttacatgcagaggaatccccagatgccccag
tacagttccccccagcccggctcggccttatctccacgtcagccttctggaggacagatg
cacacaggcatgggctcctaccagcagaactccatggggagctatggtccccaggggagt
cagtatggcccacagggaggctaccccaggcagccaaactataatgccttgcccaacgct
aactaccctagtgcaggcatggctggaagtatgaaccctatgggtgctggaggtcagatg
catgggcagcctggcatcccaccttatggcacactccctccagggagaatgagtcacgcc
tccatgggcaaccggccatatggccctaacatggccaatatgccacctcaggtcgggtcg
gggatgtgtcccccaccagggggcatgaaccggaaaactcaagaaactgctgtcgccatg
catgttgctgccaactctatccaaaacaggccaccaggctaccccaatatgaatcaaggg
ggcataatgggaactggacctccctatggacaagggattaatagtatggctggcatgatc
aaccctcagggacctccatatcccatgggtggaaccatggccaacaattcagcagggatg
gcagccagcccagagatgatgggccttggggatgtcaagttaactccagccaccaaaatg
aacaacaaagctgatggaacgcccaagacagaatccaaatccaaaaaatccagttcttct
actacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagaggaag
atgtgggtggaccgttatctggccttcactgaggagaaggccatgggcatgacaaatctg
cctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggagatt
ggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcgaccaacctcaat
gtcggcacttcaagcagtgctgccagctccttgaaaaagcagtatatccagtgtctctat
gcctttgagtgcaagattgaacggggagaagacccacccccagacatctttgcagctgct
gattccaagaagtcccagcccaaaatccagcctccttctccagctggatcagggtctatg
caggggccacagacacctcagtcaaccagtagttccatggcagaagggggagacttgaag
ccaccaactccagcatccacaccacacagtcagatcccccccttgccaggcatgagcagg
agcaattcagttgggatccaggatgcttttcctgatggaggtgaccccacattccagaaa
cggaattccatgactccaaaccctgggtaccagcccagtatgaatacctctgacatgatg
gggcgcatgtcctacgagccaaataaggatccttatggcagcatgaggaaagctccaggg
agtgatcccttcatgtcctcagggcagggccccaacggcgggatgggggacccctacagc
cgagctgccggccctggcctggcaaatgtggcaatgggaccacgacagcactatccttat
ggaggtccttatgacagagtaaggacggagcctggaatgggacccgagggaaacatgggc
actggagccccacagccgaatctcatgccttccaacccagactcggggatgtattctcct
agccgctaccctccccagcagcagcaacagcagcaacgacatgattcctatggcaatcag
ttcactcaaggcaccccttctagcagccccttccccagccagcagaccacaatgtatcag
caacagcagcagaattacaagcggccaatggatagcacatacggccctactgccaagcgg
catgaaggggagatgtacagtgtgccatacagcacagggcaggggcagccccagcagcag
caattgcctccagcccagccccagcctgccagccagcaacaagctgcccagccttcacct
cagcaagatgtgtacaaccagtatggcaatgcatatcctgccactgccgctgctgctact
gagcgccgaccagcaagtggcccccagaaccagtttccattccagtttggccgagaccgt
gtctcagcaccccctggttccagtgcccagcagaacataccacctcaaatgatgggtggc
cccatacaggcatcagctgaggttgctcagcaaggcaccatgtggcaagggcgcaatgac
atgacctacaattacaccaataggcagagcacaggctctgccccacaaggccccgcctat
catggtgtgaaccgaacagatgaaatgctgcatacggatcagagggctaaccatgaaggc
tcatggccttcccatggcacacgccagcccccatatggtccctctgcccctgtacccacc
atgacaaggccccctccttccaactaccagcccccaccaagcatgcagaatcacattcct
caggtatccagccctgctcccctgcctcggccaatggagaatcgcacctctcctagcaag
tctccattcctacacactgggatgaagatgcaaaaggcagggccccctgtacctgcctcg
cacatagcacctgcccctgtgcagccccccatgatccggagggacatcaccttcccgcct
ggctctgttgaagccacacagcctgtgttgaaacagaggaggcgactcactatgaaagat
attggaactccagaggcatggcgagtaatgatgtccctcaaatctgggctgctggcagag
agcacatgggcattagacaccattaacatcctgttgtatgatgacaacagtatcatgacc
ttcaacctcagtcagctcccagggttgctagaactccttgtggaatatttccgacgttgc
ctgattgagatctttggcattttaaaggagtatgaggtgggtgacccaggacagagaaca
ctactggaccctgggagattcagcaaggcgtctagtccagccccggtagagggtgaagat
gaggaagattttctaggtcctaaattagaggaggaagaagaggaaatagttgaaaatgat
gaggagatggccttttcaggcaaggacaaggcagcctcagaaaatagcgaggagaaactt
actagtaagtttgacaaacttccagtaaagatcgtgcagaagaatgacccatttgtggtg
gactgctcagataagcttgggcgcgtgcaggagtttgacagtggcctgctgcactggcgg
attggtgggggggacaccactgagcatatccagacccactttgagagcaagacagagctt
ctgcctactcagcctcatatgccctgcctaccagtcacccggaaacatgtcatagcagga
gagtgtacacaagggacaacagaacaagagggccccccacctgatggccccccagaaaaa
cggatcacagccactatggatgatatgttgtccactcggtctagcacattgaccgaggag
ggagctaagagtacagaggctaccaaggagagcagcaagtttccatttggcatcagccca
gcacagagccaccggaacatcaagatcctagaggatgaacctcacagtaaagatgagacc
ccactgtgtacccttctggactggcaggattcccttgccaagcgttgtgtctgtgtctcc
aatactatccgaagcctgtcatttgtgccaggtaacgactttgagatgtctaaacaccca
gggctgctgctaatcctgggcaagctgatccttctacatcacaagcatccagaacggaag
caggcaccactaacttatgagaaggaggaggaacaggaccaaggggtgagctgcaacaaa
gtggagtggtggtgggactgcttggagatgctccgggaaaacaccttggtcacactagcc
aatatctcggggcagttggacctctccccgtaccctgagagcatttgcctgcctgtcctg
gatggactcctacactgggcagtgtgcccttcagctgaagcccaggaccccttctccacc
ttgggccccaatgccgtcctttccccccagagactggtcttggaaaccctcagcaaactc
agcatccaggacaacaatgtggacctgatccttgccacaccccccttcagccgcctggag
aagttgtatagcaccatggtgcgcttcctcagtgaccgaaagaacccagtatgccgggag
atggccgtggtactgctggccaacctggcgcagggtgacagcctggcagcccgtgccatc
gcagtgcagaagggcagcatcggcaacctcctgggcttcctggaggacagccttgctgcc
acacagttccaacagagccaggcaagcctgctccacatgcagaacccaccctttgagcca
actagtgtggacatgatgcggcgggctgcccgtgcgctgctggccctggccaaggtggac
gaaaaccactcagagttcacgctgtacgagtcacggctgttggacatctcggtatcacca
ttgatgaactcattggtttcacaagtcatctgtgacgtactgtttttgattggccagtca
tga
DBGET
integrated database retrieval system
