Sturnira hondurensis: 118978615
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Entry
118978615 CDS
T07222
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
shon
Sturnira hondurensis
Pathway
shon03020
RNA polymerase
shon03420
Nucleotide excision repair
shon05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118978615 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
118978615 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
118978615 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shon03021
]
118978615 (POLR2B)
03400 DNA repair and recombination proteins [BR:
shon03400
]
118978615 (POLR2B)
Enzymes [BR:
shon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118978615 (POLR2B)
Transcription machinery [BR:
shon03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
118978615 (POLR2B)
DNA repair and recombination proteins [BR:
shon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
118978615 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
118978615
NCBI-ProteinID:
XP_036890056
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcagacgaggatatgcaatatgatgaggatgatgatgaaatcaccccagat
ttgtggcaagaagcatgctggattgtaatcagttcctattttgatgagaaaggcttggtc
agacaacagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgctccacctatagacctgcaagctgaagctcagcatgcgagtggagaagttgaagaa
ccgccaaggtatttgctgaagtttgaacaaatttatctctccaagcctacccactgggaa
agagatggtgctccttcaccaatgatgccaaatgaagccagattaagaaatctcacgtat
tctgctccactttatgttgatataacaaaaacagttattaaagaaggcgaagagcaactt
cagactcagcatcagaaaactttcataggaaaaattccaattatgttgcgttcaacttac
tgcctgttgaatggcttaacagatcgtgacctttgtgaattaaatgaatgccccttggat
cctggtggctatttcattattaatgggtcagaaaaggttctgattgctcaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattctaaatatgcctacacaggggag
tgtagatcatgtctggagaattcttcccgacccaccagtacaatttgggttagcatgctg
gcaagaggaggacagggtgcaaaaaagagtgccattggtcagcgcattgtggcaacttta
ccatatatcaagcaagaagtccccatcattattgtgttcagagcattaggttttgtgtct
gacagagatattttagagcatattatttatgattttgaagatccagagatgatggaaatg
gttaaaccttctctggatgaagcttttgttatccaagaacagaatgttgcactaaatttc
attggctcaagaggggcaaaacctggcgtcaccaaagagaaaagaattaaatatgcaaag
gaagtcttacaaaaagaaatgctccctcatgttggtgtcagtgatttttgtgagaccaaa
aaagcttatttcttggggtacatggttcataggttgcttctagcagctttgggtagaaga
gaattagatgacagagatcactatggaaacaaaagattggatcttgctggaccactactt
gcattcttatttagaggcatgtttaagaatttgcttaaagaagtacggatctatgcacag
aagtttattgatcgaggaaaggattttaatttggagttggcaattaaaacaaggattata
tctgatggcctaaaatattctttagctactggaaactggggcgaccaaaagaaagctcat
caagccagagctggagtatctcaggtattaaaccgcctgacttttgcatctactctttct
cacctgcgtcgtttgaattctcctattggtagagatggcaagttggccaaaccaagacag
ttgcataacacgttgtggggaatggtgtgtcctgctgagaccccagagggccatgctgtg
ggacttgtgaagaatttagccctgatggcttatatttcagttggatcgcaaccttctcca
attctggaatttttagaagaatggagtatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaaccaaaatttttgttaatggctgctgggttggaatacataaagatcct
gaacaacttatgaacactctgaggaaattgcggcgtcagatggacatcattgtgtctgaa
gtttctatgatcagagatattcgagagagggagattcggatctatacagatgcaggtcgt
atttgtagaccacttctgattgtggaaaaacaaaagctgctattgaagaagagacatatt
gatcaattgaaggagagagaatataacaactacagttggcaggatcttgtggccagtgga
gtagtggagtatatcgatactctagaagaagaaacagtaatgcttgcaatgactccagat
gatttgcaggagaaggaagtagcttattgttccacgtatacacattgtgagattcacccg
tcaatgattcttggtgtctgtgcatctattattccatttcctgatcacaaccagtcccct
agaaacacataccagtctgctatgggtaagcaggctatgggagtttatatcaccaacttt
catgttcgtatggatacattggctcatgttctttattatcctcaaaaaccacttgtgact
acacggtctatggagtatctgcgatttagagagctgccagcgggtatcaactcaattgtg
gccattgcatcatatactggatacaatcaagaggactctgtcatcatgaatcgttcagct
gtagatcgaggctttttcaggtctgttttctatcgatcatacaaagaacaggagtctaaa
aaaggatttgatcaagaagaagtttttgagaagcctacacgtgaaacatgccagggtatg
aggcatgccatttatgacaagctggatgatgatggcttgatagctcctggggttcgtgta
tcgggagatgatgttattataggcaaaacagtcaccttgcctgaaaatgaggatgaattg
gagagcactaatagacgctataccaagagagactgtagcacttttctcagaactagtgag
acaggcattgtggatcaggttatggtaaccctcaaccaggaaggatataaattttgtaag
ataagggtacgctctgttagaatcccgcagattggagataaatttgccagtcgacatggt
cagaagggtacttgtggtattcagtatagacaagaggatatgcctttcacctgtgaaggt
atcacccctgacatcatcataaatccccatgccatcccctctcgtatgactattggtcac
ttgattgaatgtcttcaagggaaggtttcagctaacaagggtgaaattggtgatgccact
ccatttaatgatgctgttaatgtacagaagatttctaaccttttgtctgattatggctac
catctcagaggaaatgaggtcttgtacaatgggttcactggcagaaaaatcacatcacaa
attttcattggccccacttattaccagcgtttgaagcacatggtggatgacaagattcat
tctcgtgctaggggacctattcagattcttaacagacaacccatggagggcagatcccgt
gacggtggcctgcgttttggagaaatggaacgagattgtcagattgcccacggagcagcc
cagtttttaagggaaagattgtttgaggcatcagatccgtatcaggttcatgtttgcaat
ctttgtggaataatggcgatcgctaacaccaggacgcatacgtacgaatgcaggggctgt
cgaaataaaacccagatttctttggtgcgaatgccttacgcatgcaaactattgtttcag
gagcttatgtctatgagtattgctcctcgaatgatgagtgtttag
DBGET
integrated database retrieval system
