Sturnira hondurensis: 118979158
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Entry
118979158 CDS
T07222
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
shon
Sturnira hondurensis
Pathway
shon04151
PI3K-Akt signaling pathway
shon04510
Focal adhesion
shon04512
ECM-receptor interaction
shon04518
Integrin signaling
shon05165
Human papillomavirus infection
shon05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118979158 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118979158 (TNR)
04518 Integrin signaling
118979158 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118979158 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
118979158 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
118979158 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
shon00536
]
118979158 (TNR)
Glycosaminoglycan binding proteins [BR:
shon00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118979158 (TNR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
EGF_Tenascin
Fn3_Dep-1_3rd
Fn3_PBP1
Pur_ac_phosph_N
EGF_2
Fn3_VIN3
FN3_Tor_3rd
Fn3_ELFN
DUF7949
Motif
Other DBs
NCBI-GeneID:
118979158
NCBI-ProteinID:
XP_036891036
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MGADGEAGVLKNMLLGVNLILLGSMLKPSECQLEVPTERVQRQAVEEEGGVASYNTSDNE
PPVVFNHMCNINVPLDSLCSSGLEASAEREVSAEDEEPAEYLGQTSDQENQVTFTHQIKL
PKQACPCAGSARVLRELLSRIEMLEREVSVLRDQCGSCCQDGAATGHLDYIPQCGGHGNF
SLESCGCVCHEGWFGKNCSEPYCPLGCSGRGACVDGQCICDSEYGGDDCSELRCPADCSS
RGLCVDGQCVCEEPYVGEDCSVLKCPGDCSGKGTCANGTCWCQEGYVGEDCGQRRCPNAC
SGRGQCQEGLCFCDEGYQGPDCSAAAPPEDLRVAGISDRSIELAWDGPMAVTEYVISYQP
TAPAGLQLQQRVPGDWRGVTITELEPGLTYNISVHAVISNILSLPITAKVATHLSTPRGL
QFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEYI
VNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLV
GGEGGKTTFRLQPPLSQYSVQALRPGSRYQVWVSAIRGANESEATTTQFTTEIDAPKNLR
VDSRTATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHELLVPEATGPTTRATLDDLVPGTE
YGVGISAVMNSQQSIPATMNARTELDSPRDLMVTASSDTSISLIWTKASGPIDHYRITFT
PSSGIASEVTVPRDRSAHTLTDLEPGAEYIISIAAERGRQQSLESTVDAFTGFRPISHLH
FSHVTSSSVNITWSDPSPPADRLILNYSPRDEEDEMTEVSLDATKRHAVLMGLQPATEYI
VNLVAVHGTVTSEPIVGSITTGIDPPRDVTISSVTKNSVVVSWSPPVASLDYYRVSYRPI
LVGRLDSSVVPNTVTEFTVTKLQPATEYEISLNSVRGREESERVCITVYTAIDNPKDLIA
TNVTPTEALLRWRAPGGDVESYVIVLTRFAVAGETIVVDGGSEEFQLTDLLPSTHYTVSI
HATSRPLPSGRVPSRRLTSSTVSTNFSTPLDPPANLTASEVTLQSALISWQPPRAEIENY
ILTYKSTDGSRKELIVDAEDTWIRLEGLSESTNYTVLLQAAQDAQRSGVTSTTFTTGGRV
FPHPQDCAQHLMNGDTLSGVYTIFLRGELRQKLQVYCDMTTDGGGWIVFQRRQNGQTDFF
RKWAEYRVGFGNLEDEFWLGLDNIHRITSQGRYELRVDLRDGQEAAFAHYDKFSVEDSRS
LYKLRIGAYNGTAGDSLSYHHGRPFSTEDRDNDIAVTNCALSYKGAWWYKNCHRTNLNGK
YGESRHSQGINWYHWKGHEFSIPFVEMKTRPYNPRPTAGRKRRSLHF
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggacggggaagcaggggtcctgaagaacatgctccttggcgtcaacctgatc
cttctgggctccatgctcaagccctcagagtgtcagctggaggtgcccacggaaagggtc
cagagacaggcggtggaggaggagggaggcgtggccagctacaacacctccgacaatgag
ccgcccgtggtcttcaaccacatgtgcaacatcaacgtgcccctggacagtctctgctcc
tcggggctggaggcctccgccgagagggaggtgagtgcggaagatgaggagccggccgag
tacctgggccagacctccgaccaggagaaccaggtcaccttcacccaccagatcaaactc
cccaaacaggcctgcccgtgcgccggttcagcccgggtgctacgggagctgctcagccgc
atcgagatgctggagagggaggtgtcggtgctgcgggaccagtgtggcagctgttgccaa
gacggtgccgccacaggacacctggactacatccctcagtgcggtggccacggcaacttc
agcctcgagtcctgtggctgtgtctgccacgaaggctggttcggcaagaactgctcggag
ccctactgccccctgggctgctccggccggggcgcatgtgtggacggccagtgcatctgt
gacagcgagtacgggggcgatgactgctccgagctccggtgccccgcggactgcagctct
cgggggctctgcgtggacgggcagtgtgtctgcgaggagccctacgtgggggaggactgc
agcgtgctcaagtgccccggggactgttcggggaaggggacctgtgccaacgggacctgc
tggtgccaggagggctacgtcggggaggactgcggccagcggcggtgcccgaatgcctgc
agtggacgagggcagtgccaggagggactctgcttctgtgacgagggctaccaaggcccg
gactgctcggcagctgcccctccagaggacttgcgagtggctggtatcagcgacaggtcc
attgagctggcatgggacgggccgatggcagtgacggaatatgtgatctcttaccagcca
acggccccggcgggcctccagctccagcagcgggtgcctggagattggcgtggtgtcacc
atcaccgagctggagccaggtctcacctacaacatcagcgtccacgctgtcattagcaac
atcctcagccttcccatcactgccaaggtggccacccatctctccaccccccgagggctg
cagttcaagaccatcacagagaccaccgtggaggtgcagtgggagcccttctccttctcc
ttcgatgggtgggagatcagcttcattccaaagaacaatgaaggaggggtgatcgcccag
ctccccagcgatgtcacctccttcaaccagacgggactgaagcctggggaggagtacatc
gtcaacgtggtggctctgaaggagcaggcccggagccctcccacctcggccagcgtctcc
acggtcatcgatgggcccacccagatcttggtacgagatgtctccgacaccgtggccttc
gtggagtggactccccctcgagccaaagtcgacttcatcctcttgaagtacggcttggtg
ggcggggaaggcgggaagaccaccttccggctgcagccccccctgagccagtactcagtc
caggccctgcggcccggctcccgctaccaggtgtgggtcagtgccatccgcggggccaac
gagagcgaggccacgaccacccagttcacaacagagattgacgcccccaagaatctacgg
gtcgactcccgcacggcaaccagccttgacctcgaatgggacaacagcgaagcggaggtc
caggagtacaaggtcgtgtacagcaccctggcgggcgagcagtaccatgaactgctggtc
cccgaggccacgggtccaaccaccagagccaccctcgacgatctggtgccgggcactgag
tacggcgttggaatatctgccgtcatgaactcgcagcaaagcataccagccaccatgaat
gccaggacggaactggacagccctcgggacctcatggtgacagcctcctcggacacctcc
atctccctcatctggaccaaggccagcggccccattgaccactaccgaatcaccttcacc
ccatcctcggggatcgcctcagaggtcaccgtgcccagggacaggagcgcgcacacgctg
accgacctggagcccggggcagagtacatcatctcgattgccgccgagaggggtcggcag
cagagcttggagtccactgtggacgccttcacaggcttccgccccatctcgcatttgcac
ttttctcacgtgacctcctccagcgtgaacatcacctggagtgacccatcccccccggca
gacagactcattctgaactacagccctcgggatgaggaggacgagatgacagaagtctcc
ctggatgccaccaagaggcacgcggtcctgatgggcctgcagccggccaccgagtacatc
gtgaacctggtggcagtccatggcactgtgacctctgagcctatcgtgggctccatcacc
acaggaatcgacccccccagagacgtcacaatcagcagtgtgaccaagaactccgtggtg
gtctcctggagcccccctgtcgcatctttggattactaccgagtgtcctatcggccaatt
ctagtggggcggctggacagctccgtggtgcctaacactgtgacagaattcaccgttacc
aagctgcagccagcgaccgaatacgaaatcagccttaacagcgtgcggggcagggaggag
agtgagcgtgtctgcattaccgtgtacacagccatagacaaccccaaggacctgatcgcc
accaacgtcactccaacggaagccctgcttcggtggagggccccagggggtgatgtggag
agctacgtcattgttctcacacgcttcgcagtcgccggagagaccatcgtggtggatggg
ggcagtgaggagttccagctgacggacctgctccccagcacgcactacaccgtcagcata
cacgccaccagcaggcccctccccagcgggcgcgtccccagcaggcgcctcaccagcagc
acggtcagcaccaacttctctacacccctggaccctcctgcaaacctgacagccagtgaa
gtcaccttacaaagcgccctgatctcctggcagcctcccagagcggagattgagaactac
atcttgacctacaaatccaccgacggaagccgcaaggagctgattgtggacgcagaggac
acgtggattcgactggagggcctgtctgagagcaccaactacactgtcctcctgcaggcg
gcccaggacgcccagcggagcggcgtcacctccaccaccttcaccacagggggccgcgtg
ttcccccacccgcaggactgcgcccagcacttgatgaatggggacacgctgagtggggtc
tacaccatctttctccgtggggagctccgccagaagctgcaggtgtactgcgacatgacc
acggacggcggcggctggatcgtgttccagagacggcagaatggccaaaccgacttcttc
cggaagtgggccgagtaccgagttggcttcgggaacctggaggatgagttttggctgggg
ctggacaacatccacaggatcacgtcccagggccgctacgaactgcgcgtggacctgcgg
gacggccaggaggccgccttcgcccactatgacaagttctccgtggaggacagcagaagc
ctgtacaaactccgcatcggggcctacaatggcaccgcaggggactcgctcagctaccat
cacgggcgccctttctccactgaggacagagacaacgacatcgcagtgaccaactgcgcc
ctgtcctacaagggggcatggtggtataagaactgccaccgaaccaacctcaacgggaaa
tacggggagtccaggcacagtcagggcatcaactggtaccactggaaaggccatgagttc
tccatcccctttgtggaaatgaagacgcgcccctacaacccccgtcccacggcggggcgg
aaacggcggtccttgcacttctga
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