Sturnira hondurensis: 118979229
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Entry
118979229 CDS
T07222
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shon03000
]
118979229 (RC3H1)
04121 Ubiquitin system [BR:
shon04121
]
118979229 (RC3H1)
Transcription factors [BR:
shon03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
118979229 (RC3H1)
Ubiquitin system [BR:
shon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118979229 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf_CCCH_4
zf-CCCH_4
FYVE
PaaA_PaaC
Baculo_IE-1
Vesi_VP2
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
118979229
NCBI-ProteinID:
XP_036891159
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQPPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLEHGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPAAAVLPDE
GTVDLPGRKPPALPNGIVSAGNAVTQLIPRGTDPGYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSIPALAVNPHPVPPRGPTDLPPMPVTKPLQMVPRGSQLYPAQQADVYYQDPRGAA
PPFDPAPYQQGVYYTAPPCVSRFVRPPPSAPEPAPPYLDHYPPYLQDRVINPPYGTQPHQ
YPPMYPPHCDGRRVYPAQSYPREEIFRESSIEIPPPAVPSYVPEARERYQQVEGYYPVAP
HPAQIRPSYIRETPYSRLPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPP
PFHAEEFLDEDLKAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSAEMMNVES
KGVRDQRLEHHQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPLQAMAPQGA
PTKSMNMSDYNPYGAHGSWGGSPYAPHQSATSQAHFSERERISMSEVASHGKPLPSADRE
QLRLELQQLNHQISQQTQLRGLEREANTLASQSQTPPAPPKWPGMVSSEQLSLELHQVER
EIGKRTRELSLENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLTLTFSDVPNGSALTQ
ENISLLSNQTSSLNLAEDPEGGGDNNDSQRSGVVPSPAP
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggatttcctttcctgcccgatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgcccattcgaccagaccactatcaatacagac
attgagctcctcccagtgaactcggcattgctgcagctagtgggtgctcaggtccctgag
cagccgcccattactctgtgtagtggggtagaagacacgaagcattatgaagaagccaag
aaatgtgtagaagaattagcattgtacctgaaaccactcagcagtgctagaggagtgggt
ctgaatagcacgacccagagtgttctaagtcgcccgatgcagagaaagctggtgactctg
gtccactgccagctcgtggaagaagaaggcaggattcgggccatgcgggcagcacgctct
ttgggcgagaggacggtcacagagctcatcctccagcaccagaaccctcaacagctctct
tcgaatctttgggcggcggtcagggcccggggctgccagttccttggaccagcaatgcag
gaggaagctctaaagctggttctcctggccttagaagatggttctgctttgtcaagaaaa
gtgttggttctctttgtggtgcaaaggttggagcctcggttccctcaagcgtccaaaacc
agcatcgggcacgttgtccagctcctctatcgtgcctcctgcttcaaggtcaccaaacgt
gatgaagactcttctctgatgcagctaaaggaagagtttagaacctacgaagcgctgcgg
cgggagcacgactcccagatcgtgcagatcgcgatggaagcaggcttgcgcatcgcgcca
gaccagtggtcctcactgctttacggagaccagtctcacaaatctcacatgcagtccatc
attgacaagttgcagactccagcctcttttgcacaaagtgttcaggaactaacaattgct
ctccagcggactggagacccagcaaacttgaaccgactgagaccccatttggagctattg
gcaaacattgaccccagtccagatgcccctcctccgacttgggagcagctggagcacggg
ctggtcgccgtgcgcacggtggtgcacgggctggtggattacatccagaaccacagcaag
aagggggccgaccagcagcagcctccacagcatagcaaatacaaaacatacatgtgtcga
gatatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcccag
gaggaactggaaaaattccgtaagatgaacaaacgcctcgttcccagaagacccctgagc
gcctctttgggtcagctgaacgaggtgggcctgcctgcggcagctgtcctcccagatgag
ggcaccgtggatctgcctggcaggaagccccctgctctgcccaatggaattgtgtcggca
gggaacgcagtcacgcagctgattccacgcgggacggaccccggctacgactccagtctg
aaaccagggaagatcgaccatctgagcagcagcgcccctgggtcccctcccgacctgcta
gaatctgtccccaagagcattcctgccctagctgtgaacccgcatcctgtacctccaagg
ggaccgacagacctgcctcccatgcctgtcaccaaaccgctccagatggtgcctcggggc
tctcagttgtacccagcacagcaggcagacgtctactatcaggatccacggggagcggct
ccgccctttgaccccgcaccgtatcagcagggtgtgtactacactgcgccgccgtgtgtg
tcccgcttcgtgcgacctccaccgtcggctccagagcccgcacctccctacctggatcat
tacccaccctacctccaagatcgcgtcataaaccccccgtatggcacgcagccacaccag
tacccacccatgtacccgccacactgtgacggccgtcgagtgtaccctgctcagtcttac
cccagggaggagatcttccgagaaagttccattgagattccacctccagcagtaccttcc
tacgtaccagaggccagagagagataccagcaggtggagggttactatccggtggcccct
catccagcgcagatcagaccttcgtacatcagagagacgccctatagccggcttcctccc
ccgcagccccatcccagtctagatgagctgcatcgaagacgaaaggaaataatggcccag
ctggaggaaaggaaggttatctccccgccgcctttcgcgccctcgccaacgctgcctccg
cccttccacgcggaggaatttctggatgaagacttgaaggctgggaaatacaaaggaaat
gattatagccagtactccccctggtcatgtgacaccatcggctcctacatcggaaccaaa
gatgcaaaacccaaagatgtcgtggcagctgggagtgcggagatgatgaatgtggagagt
aaaggagtgagagaccagcgactggagcatcatcagagaagagctgccgaaaccagtgac
gatgacctcatcccatttggagaccggcccacagtgtcgcggttcggtgccatctctcga
acctccaaaacaatatatcagggtgctggcccgttgcaggcgatggcacctcagggagcc
cccacaaaatctatgaacatgtcagactacaatccgtacggagcccacggcagctggggc
ggctccccgtacgcccctcaccagagcgcgacgtctcaggcgcacttcagtgagagggag
agaatatccatgtcagaagtggccagtcatggaaaacccctcccgtctgcggacagagag
cagctacgactggaactgcagcaactgaaccatcaaatcagccaacagacccagctgcgc
ggactggagagggaggcgaacaccctggcaagccagtcacagaccccaccagcaccccca
aaatggcccggaatggtctccagtgagcagttgagcttggaactgcaccaggtggaacgg
gaaatcgggaagagaacccgggagctgagtctggagaaccagtgttctctggacatgaaa
agcaaactgaatacaagtaaacaagcagaaaatggacaaccggaaccccaaaataaggtt
ccagctgaggaccttacattgacattcagtgatgtaccgaatggatcagccttgacacaa
gagaatatcagcctcctgtcaaaccagaccagctctctgaacctggcagaggaccctgag
ggaggaggggacaacaacgactcccagaggtcaggggtcgtgcccagccctgctccctga
DBGET
integrated database retrieval system
