Sturnira hondurensis: 118979392
Help
Entry
118979392 CDS
T07222
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shon03041
]
118979392 (DDX1)
03016 Transfer RNA biogenesis [BR:
shon03016
]
118979392 (DDX1)
Enzymes [BR:
shon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118979392 (DDX1)
Spliceosome [BR:
shon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118979392 (DDX1)
Transfer RNA biogenesis [BR:
shon03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
118979392 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
118979392
NCBI-ProteinID:
XP_036891320
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGRKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPAHLKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPDSYVVKSQHTGSAQVAQTKLLPNAPKALIVEPSRELAE
QTLNNVRQFKKYVDNPKLRELLIIGGVAAREQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKADRLWERLGKNHIRTDEVHAKDNTRPGAN
SPEMWSEAVKVLKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFVQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRTAGGGNYKGHVEVLAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcattctccgagatgggtgttatgcctgaaattgcacaagccgtggaagagatg
gattggcttctcccaactgatatccaagcagagtccatcccgttgatcctaggaggtggc
gatgtacttatggctgcagaaacaggaagtggaaaaactggtgcgttcagtattccagtt
atccagatcgtgtacgagactctgaaggaccagcaggaaggcagaaaaggaaaaacgacg
attaaaactggtgcttcagtgctcaacaaatggcagatgaacccgtacgacagaggatct
gcttttgccattgggtcagacggtctttgctgtcagagcagagaggtgaaggagtggcat
ggatgcagggccactaaaggcctcacgaaagggaagcactactacgaggtgtcctgccac
gaccaggggctgtgccgagttgggtggtcttccatgcaggcttccttggatctcggtact
gacaagtttggatttggctttggtggaacaggaaagaaatcccataacaaacagtttgat
aattatggagaggaattcactatgcatgacaccattgggtgttacctggatatagataaa
ggacatgtcaaattctccaaaaatggaaaagacctcggtctggcatttgaaataccagcc
catttgaagaaccaagccctctttcctgcctgcgtgttgaagaacgctgaactgaaattt
aactttggtgaagaagaatttaagtttccaccaaaagacggttttgtcgctctttccaag
gcgccagacagttacgttgtcaaatcgcagcacacaggcagcgcacaggtggcccagacc
aagctcctccccaacgctcccaaggccctcattgtcgagccctcgcgagagttagccgag
cagactctgaacaacgtcagacagtttaagaagtacgtcgacaatccgaaattaagggag
cttctgatcatcggcggcgttgcagctcgggagcagctgtctgtcttggacaacggggtg
gatatagtggttggtaccccgggaaggctggatgacttggtgtcgactggaaagctaaac
ttatcccaagttagattcctggtcctggatgaggccgacgggcttctttctcaagggtac
tctgacttcataaacaggatccacagtcagattcctcagattacctccgatggaaaaaga
cttcaggtgattgtttgctctgctactttgcattcttttgatgtaaagaaactgtctgag
aagataatgcattttcccacgtgggttgatttaaaaggagaggattctgttcccgatacc
gtgcaccatgtggttgtcccagtgaaccccaaggctgacaggctctgggaaaggctcggg
aagaaccacatcagaacagatgaagtacatgcaaaagataacacaaggcctggagctaac
agtccagagatgtggtccgaagccgttaaggtcctgaagggcgagtatgccgtccgggcg
atcaaggagcacaagatggaccaggcgatcatcttctgcagaaccaagatcgactgtgac
aacctggagcagtacttcgtgcagcagggaggaggacctgataaaaagggacaccagttc
tcatgtgtttgtcttcacggtgacagaaagcctcacgagagaaagcagaacttggaaaga
tttaagaaaggcgatgtgcgattcttgatctgcacggacgtggctgccagagggatcgac
atccacggcgttccttacgtcataaacgtcaccctgcctgacgaaaagcagaactacgtc
caccggatcggccgagtggggagggcggaaaggatggggctggccatttccctggtggcg
acagagaaagagaaggtttggtaccacgtgtgcagcagccgcgggaaaggctgttacaac
acgcggctcaaggaggacgggggctgcaccatctggtacaacgagatgcagctgctgtcg
gagatcgaggagcacctgaactgcaccatttcccaggtggagccggatataaaggtgcca
gtggacgagttcgatgggaaagtgacctacggtcaaaaaaggacagctggcggtgggaac
tataaaggccacgtggaagtgctggcacctaccgttcaagagctggccgcccttgagaag
gaggcgcagacgtcttttctgcaccttggctaccttcctaaccagctgttcagaaccttc
tga
DBGET
integrated database retrieval system
