Sturnira hondurensis: 118979393
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Entry
118979393 CDS
T07222
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
shon
Sturnira hondurensis
Pathway
shon04512
ECM-receptor interaction
shon04514
Cell adhesion molecule (CAM) interaction
shon04820
Cytoskeleton in muscle cells
shon05144
Malaria
shon05205
Proteoglycans in cancer
shon05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118979393 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
118979393 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118979393 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
118979393 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
118979393 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
118979393 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shon04131
]
118979393 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
shon04090
]
118979393 (SDC1)
00535 Proteoglycans [BR:
shon00535
]
118979393 (SDC1)
Membrane trafficking [BR:
shon04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
118979393 (SDC1)
CD molecules [BR:
shon04090
]
Proteins
118979393 (SDC1)
Proteoglycans [BR:
shon00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
118979393 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Romo1
Motif
Other DBs
NCBI-GeneID:
118979393
NCBI-ProteinID:
XP_036891321
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MRRAALCFWLCALALRLQPVLPQLLATNVPPEDQDGSGDDSDSFSGSGAGALQDIILSQR
NPSTWKDLALLTVTPTAPEPTDIGPITASTSILPAIEGDKEGDTVFLAKVEPDFTSQEKT
ALPPSETTPHPTTYRVSTTRAATAQAPVTSHLHRDMQPDHPKTLAPRGAGQLDPHMPSVE
DGGPSAHERAAEEKTATHFSVGEGSGEQDFTFDVSGEITAGPVLEVGPRNELEPEPDRGA
SQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKP
SKQEEFYA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgcggcgctctgcttctggctctgcgctctggcgctgcgcctgcagccggtc
ctcccgcaactcctggcaacgaatgtgccaccggaagatcaggatggctccggggacgac
tctgacagcttctctggctcgggcgcaggtgctctgcaagacatcatcttgtcgcagcgg
aacccctccacctggaaggacctggcactgttgacggtcacacccacagctccagagccc
acggacatcggtcccatcactgcctccacctccatcctgccagccattgagggggacaag
gagggagacacagtgtttctggccaaggtggagcctgactttacctcccaggagaagact
gccctcccacctagtgagaccacaccacacccaaccacctaccgggtgtcaacaacaaga
gctgccactgcccaggcacccgtcacctcccatctccaccgagacatgcagcctgaccac
cctaagactttagctcccagaggagctggccagcttgaccctcacatgcccagcgtggag
gacgggggtccttctgcccatgagagggctgctgaggagaaaactgccacccacttctca
gtgggggagggctctggggagcaggacttcaccttcgacgtgtccggggagatcacggct
gggcctgttctggaagttggcccgcggaatgagctggagccggagccggatcgcggggcc
tcccaaggcctcctggacaggaaggaggtgctgggaggggtcatcgccggaggcctggtg
gggctcatctttgccgtgtgcctggtgggcttcatgctgtaccggatgaagaagaaggac
gagggcagctactccttggaggagccgaaacaagccaatggtggggcctaccagaaaccc
agcaagcaggaggagttctacgcctga
DBGET
integrated database retrieval system