Sturnira hondurensis: 118979609
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Entry
118979609 CDS
T07222
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
shon
Sturnira hondurensis
Pathway
shon02010
ABC transporters
shon04148
Efferocytosis
shon04975
Fat digestion and absorption
shon04979
Cholesterol metabolism
shon05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118979609 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118979609 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
118979609 (ABCA1)
04979 Cholesterol metabolism
118979609 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
118979609 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shon02000
]
118979609 (ABCA1)
Transporters [BR:
shon02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118979609 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
118979609
NCBI-ProteinID:
XP_036891636
LinkDB
All DBs
Position
Unknown
AA seq
2305 aa
AA seq
DB search
MFRSRTSSDINDQPQRPCCELQPLPPGIPSPSQVAVGDSRGDMACWPQLRLLLWKNLTFR
RRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKAMPSAGTLPWIQGIICNAN
NPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSQKDTSMKDIHSVLRTLQKIESN
SSGLTLQDFLVGNETFSGFLNHNLSLPRATVDKILEADVSLRKVFLQGYQLHLTDLCNGS
KLKEVIHLDDHDVSTLCSLPPEKLEAAEQVLRSNVDILKPILTGIDTLSPVLNKELAEGT
KTLLDSLGTLAQELLSMRSWSDMRQEVVFLTNANSSGSSTQIYQAVSRIVCGHPEGGGLK
IKSLNWYEDNNYKALFGGNGTEEDAGTFYDNSTTPYCNDLMKNLESSPLSRIIWKALKPL
LVGKILYTPDTPATRQVMAEVNKTFQELAVFHDIKGMWEELSPKIWTFMESSTEMDLVRT
LLNSRGNDRFWEQRLVGLDWTAKDILAFLAKYPEDVQSTNGSVYTWREAFNETSRAVQTI
SRFMECVNLDKLEPIATEVWLINKSMELLDDRKFWAGIVFTGISPGSVTLPRHVKYKIRM
DIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGSEKNTGVY
VQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDN
GILWFSWFVSSLIPLLVSAGLLVVILKFGNLLPYSDPSVVFVFLSVFAVVTILQCFLIST
LFSRASLAAACGGIVYFTLYLPYVLCVAWQDYVGFTLKIFASLLSPVAFGFGCEYFALFE
EQGIGVQWDNLFESPVEEDGFNLTTSVSMMLFDAFLYGVMTWYIEAVFPGQYGIPRPWYF
PCTKSYWLGEESDAKSHPGSSQKGVSEICMEEEPTHLKLGVSIQSLMKVYRDGMKVAVDG
LTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRAEMSTIRQNLGVC
PQHNVLFDMLTVEEHIWFYARLKGLPEKTVKAEMEQMAMDVGLPPSKLKSKTSQLSGGMQ
RKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADILG
DRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKVVPE
LPPAGQSGGRGGEVQRLVALTQDVSAISSLIQKHVAEARLVEDIGHELTYVLPYEAAKEG
AFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAETSDGTLPARRNRRVFG
DKQSCLRPFTEDDVVDTNDSDIDPESRETDLLSGMDGKGSYQVKGWKLTQQQFVALLWKR
LLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYNEQYTFVSNDAP
EDTGTQELLNALTREPGFGTRCMEGNPIPERPCLVGEEEWTTAPVPQTIVDLFQNGNWTM
ENPSPTCECSNDRIKKMLPVCPLGAGGLPPPQRKQNTEDILQNLTGRNISDYLVKTYVQI
IAKSLKNKIWVNEFRYGGFSLGARNSQSLPPSQEVNDAIKQIKKILNLAKDSSSDRFLSS
LGSFMKGLDTKNNVKVWFNNKGWHAVSSFLNVINNAILRANLQKGANPSQYGITAFNHPL
NLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPV
IYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPA
SFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLG
RGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFI
RPRPVKAKLPPLNDEDEDVRRERQRILDGGGHNDILEIKELTKIYRRKRKPAVDRICVGI
PPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDA
ITELMTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTA
MALIGEPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAI
MVNGKFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQDFFGLAFPGSVLKEKHRNML
QYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDDHLKDLSLH
KNQTVVDVAVLTSFLKDEKVKESYV
NT seq
6918 nt
NT seq
+upstream
nt +downstream
nt
atgttccggagtaggacctcttcagacattaatgaccagccacagcgtccctgctgtgag
ctccagccactgcctccagggattcccagtcccagtcaggttgctgtgggcgacagccga
ggtgacatggcttgctggcctcagctgaggctgctgctgtggaagaacctcactttcaga
agaaggcaaacatgtcagttgttgctggaagtggcctggcctctcttcatcttcctgatc
ctgatctctgttcggctgagctacccgccctatgaacaacatgaatgccactttccaaac
aaagccatgccctccgcagggacacttccctggattcaggggattatctgtaatgccaac
aacccgtgtttccgttacccgactcccggcgaggctcccggagttgttggaaactttaac
aaatccattgtgtctcgcctgttctcagatgctcagcggcttcttttgtacagccagaaa
gacaccagcatgaaggacatacacagtgttctgagaacattacagaagattgagagtaac
agctcaggtttgacccttcaggatttcctggtgggcaatgagaccttctctggattcttg
aatcacaacctctctctgcctagagctactgtggacaaaatactggaggctgacgtcagt
cttcgcaaggtatttctgcaaggctaccagttacatttgactgatctgtgcaatggatcc
aagttgaaagaggtgatccaccttgatgaccacgacgtttccacactttgcagcctgccg
ccggagaaactggaggcagctgagcaagttctgcgttccaacgtggacatcctgaagccc
atcctgacgggaatagacaccctgtcacctgtcctgaacaaggagctggctgaaggcaca
aaaactttgctggacagtctcgggactctggcccaagagctgttgagcatgaggagctgg
agtgacatgcggcaggaggtggtgtttctgaccaacgcgaacagttccggctcctccacc
cagatataccaggctgtctcccgcatcgtctgtggccatcccgagggtgggggcctgaag
atcaagtccctcaactggtatgaggacaacaactacaaagccctcttcggaggcaatggc
accgaggaggatgctggcaccttctatgacaattctacaactccatattgcaatgatttg
atgaagaatttggagtccagtcctctttcccgcatcatatggaaagctctcaagcctctg
cttgttgggaagatcctgtatacacctgacactccagccacaaggcaggttatggctgag
gtgaataagactttccaggaactggctgtgtttcatgatataaaaggcatgtgggaggaa
ctcagccccaagatctggaccttcatggaaagcagcacagaaatggaccttgtccggacg
ctcttgaacagcagaggcaacgaccgcttctgggaacagcgattggttggcttggattgg
accgccaaagatattttggcctttctggccaagtacccggaggatgtccagtccaccaat
ggctctgtgtacacctggagggaagctttcaatgagaccagccgggcagtgcagaccatc
tctcgcttcatggagtgtgtcaacctggacaagctggaaccaatagcaacagaagtttgg
ctcatcaacaaatccatggagctgctggatgacaggaagttctgggccggcatcgtgttc
actggaattagcccgggcagtgtcacgctgccccgtcatgtcaagtacaagatccgaatg
gacattgacaacgtggagaggacgaataagatcaaagatgggtactgggaccctggtcct
cgggctgacccctttgaggacatgcggtacgtctgggggggctttgcctacctgcaggat
gtggtggagcaggcgatcatcagggtactgacgggctcggagaaaaacacaggtgtctac
gtgcagcagatgccctacccctgttacgtcgatgacatcttcctgcgggtgatgagccgg
tcaatgcccctcttcatgaccctcgcctggatttattctgtggccgtgatcatcaagggc
atcgtgtatgagaaggaggcacggctgaaggagaccatgcgcatcatgggtctggacaac
ggcatcctctggttcagctggttcgtcagtagcctcatccctctgctcgtgagcgccggt
ctgctggtggtcatcctcaaattcggaaacctactgccgtacagcgaccccagcgtggtg
ttcgtcttcctgtccgtgttcgccgtggtgaccatcctgcagtgcttcctgatcagcacg
ctcttctccagagccagcctggcggcggcctgtgggggcatcgtctactttacgctgtac
ctgccttacgtgctgtgcgtggcatggcaagactatgtgggcttcacgctcaagatcttc
gcgagcctgctgtcccctgtggcttttgggtttggctgtgagtacttcgccctttttgag
gagcagggcatcggggtgcagtgggacaacctctttgagagccccgtggaggaagatggc
ttcaacctcaccacctcggtctctatgatgctgtttgacgccttcctgtatggtgtgatg
acctggtacatcgaggctgtcttcccaggccagtatgggattcccaggccctggtatttc
ccgtgcaccaagtcctactggttaggtgaggaaagcgatgcgaagagccatcctggttcc
agccagaagggagtatctgaaatctgcatggaggaggagcccacccacctgaaactgggt
gtgtccattcagagcctgatgaaggtgtaccgagatggcatgaaggtggctgtggacggc
ctgaccctgaacttctatgagggccagatcacctccttcctgggccacaatggagccggg
aagaccaccaccatgtccatcctgacggggctgttccctcccacctcgggcaccgcctac
atcctggggaaggacattcgcgctgagatgagtaccatccggcagaacctgggagtctgt
ccccagcacaacgtgctgttcgacatgctgactgtcgaagaacacatctggttctacgcc
cgcctgaaaggactcccagagaagacggtgaaagcggagatggagcagatggccatggat
gttggtttgccacccagcaaactgaaaagcaaaacaagtcagctgtcaggtggaatgcag
agaaagctgtctgtggccttggcctttgttggtggatccaaggttgtcattctggatgag
cccacagccggcgtggatccttactcccgccggggaatatgggagctcttgctgaaatat
cgccaaggccgcaccatcatcctctccacgcaccacatggacgaagcagacatcctgggc
gacaggattgccatcatttcccacgggaagctgtgctgtgtgggctcctccctgttcctg
aagaaccagctgggaacaggctactacctgaccctggtcaagaaggacgtggaatcctcc
ctcagttcctgcagaaacagcagtagcaccgtttcgtacctgaaaaaggtggtgcctgag
cttcccccagctgggcagagtggaggcagaggaggagaggtgcagaggctggtggcgctg
actcaagatgtgtctgccatctccagtctcatccagaagcatgtggccgaggcccggctg
gtagaagacattgggcatgagctgacctacgtgctgccctatgaagctgccaaagaggga
gccttcgtggagctcttccatgagattgatgaccggctctcggacctgggcatctccagt
tacggcatctcagagactaccctggaagagatatttctcaaagtggctgaagagagtggg
gtggatgctgagacctcagatggcactttgccagcgagacgaaacagacgggtctttggg
gacaagcagagctgccttcgcccgttcactgaagacgatgttgtcgatacaaatgattcc
gacatagacccagaatccagggaaacagacctgctcagtgggatggatggcaaaggctcc
taccaggtgaagggctggaaactcacacaacaacagtttgtggcccttttgtggaagcgg
ctgctgattgccagacggagtcggaagggattctttgctcagatcgtcctgccagctgtg
tttgtctgcatagccctggtgttcagcttgattgtgcccccctttggcaagtaccccagc
ctggaacttcagccctggatgtacaacgaacagtacacattcgtcagtaatgatgctccc
gaggacacgggcacccaggaactcttgaacgccctcaccagagagccgggcttcgggacg
cgctgcatggaaggaaacccaatcccagagaggccctgcttggtcggggaggaggagtgg
accactgccccggttccccagaccattgtggacctcttccagaatgggaactggacgatg
gagaacccctcacccacctgcgagtgtagcaatgacagaatcaagaagatgctgcccgtg
tgtcccctgggggccggggggctgcctcctccacagaggaagcagaacactgaggacatc
cttcaaaacctgacgggaagaaacatttcggattacctggtgaagacctatgtgcagatc
atagccaaaagcttgaagaacaagatctgggtgaatgagtttaggtacggcggcttctcc
ctgggtgccagaaattctcagtcacttcctccaagtcaagaagttaatgatgccatcaag
cagataaagaaaatcttgaatctggccaaggacagttcttcagatcgatttctcagcagc
ttgggcagtttcatgaaaggactggacacaaaaaacaacgtcaaggtgtggttcaataac
aaggggtggcatgccgtcagctctttcttgaacgtcatcaacaacgccattctgcgggcc
aacctgcagaaaggagcgaaccctagccagtacgggatcactgctttcaatcaccctctg
aatctcaccaagcagcagctctcggaagtggccctgatgaccacatcagtggatgtcctt
gtgtccatctgtgttatctttgcgatgtccttcgttcctgccagcttcgttgtgttcctg
atccaggagcgggtgagcaaagcaaagcacctgcagttcatcagcggagtgaagccggtc
atctactggctgtccaatttcgtctgggatatgtgcaactatgtggtccccgccacgctg
gtcattatcatcttcatctgcttccagcagaagtcctacgtgtcctccaccaacctgcct
gtgttggccctcctgcttttgctctatgggtggtcgatcacgcctctcatgtacccagcc
tccttcgtgttcaagatccccagcaccgcctacgtggtcctgaccagtgtgaacctcttc
atcgggatcaacggcagcgtggccacgtttgtgctggagctcttcaccgacaataagctg
aataacatcaatgatattctgaagtctgtgttcttgatcttcccacatttttgcctggga
cgggggctcattgacatggtgaaaaaccaggcaatggctgatgccctggaaaggtttggg
gagaatcgctttgtctcgccactctcttgggacctggtgggccgaaacctgtttgccatg
gccgtggaaggggtggtgttcttcctcatcactgtgttgatccagtacagattcttcatc
aggcccagacctgtaaaggcaaagcttcctcctctgaatgatgaggatgaggatgtcagg
cgggaaagacagagaattcttgatggcggaggacacaatgacatcttggaaatcaaggag
ttgactaagatatatagaaggaagaggaagcctgctgttgacaggatttgtgttggcatt
cctcctggcgagtgctttgggctcctgggagttaatggggccgggaagtcatcgactttc
aagatgttgactggagacaccactgtgaccagaggagacgctttcctcaacaagaacagt
atcttatcaaacatccacgaagttcatcaaaacatgggctattgccctcagttcgatgcc
atcacagagctgatgaccgggagagaacacgtggagttctttgccctcttgagaggagtc
ccagagaaagaagtgggcaaggtcggtgagtgggcaattcggaaactgggccttgtgaag
tacggtgaaaaatacgctggcaactacagtggaggtaacaagcgcaagctttcgacggcc
atggctttgatcggcgagccccctgtggtgtttctggatgagccgaccactggcatggac
cccaaagcccggagattcctgtggaattgtgccctaagtgtcgtcaaggagggccgatca
gtagtgcttacgtctcacagtatggaagaatgcgaagctctttgcactaggatggcaatt
atggtcaacgggaagttcaggtgtctcggtagcgtccaacatctgaaaaataggtttgga
gatggttatacaatagtggtacgaatagcagggtccaaccctgacctgaagcccgtgcag
gacttcttcggactggcctttccgggaagcgtcctcaaggagaagcaccggaacatgctg
cagtaccagctcccgtcctcgctgtcttccctggcccggatattcagcatcctttcccag
agcaaaaagcgactccacatagaggactactctgtttctcagacaacacttgaccaagta
tttgtaaactttgccaaggaccaaagtgacgatgaccacttaaaggacctgtcattacac
aaaaaccagacagtagtggacgttgcagttctcacatctttcctgaaggacgagaaagtg
aaagaaagttacgtgtga
DBGET
integrated database retrieval system
