KEGG   Sturnira hondurensis: 118979691
Entry
118979691         CDS       T07222                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
shon  Sturnira hondurensis
Pathway
shon03030  DNA replication
shon03410  Base excision repair
shon03420  Nucleotide excision repair
shon03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:shon00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    118979691 (RFC4)
   03410 Base excision repair
    118979691 (RFC4)
   03420 Nucleotide excision repair
    118979691 (RFC4)
   03430 Mismatch repair
    118979691 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shon03032]
    118979691 (RFC4)
   03036 Chromosome and associated proteins [BR:shon03036]
    118979691 (RFC4)
   03400 DNA repair and recombination proteins [BR:shon03400]
    118979691 (RFC4)
DNA replication proteins [BR:shon03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    118979691 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    118979691 (RFC4)
Chromosome and associated proteins [BR:shon03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    118979691 (RFC4)
DNA repair and recombination proteins [BR:shon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     118979691 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    118979691 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 DUF815 AAA_16 AAA_assoc_2 AAA_22 AAA_30 AAA_11 AAA_24 AAA_19 SLFN-g3_helicase RuvB_N Mg_chelatase AAA_5 ResIII AAA_28 Viral_helicase1 AAA_7 ATPase_2
Other DBs
NCBI-GeneID: 118979691
NCBI-ProteinID: XP_036891819
LinkDB
Position
Unknown
AA seq 364 aa
MQAFLKGTSISTKPPLPKDRGAAATAGSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGHELFRLRVLELNASDERGIQVIR
EKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIADKEHVKISSEGVSCLVKVSEGDLRK
AITFLQSATRLTGGKEVTEKVITDIAGMIPAETIDGVFAACQSGSFDKLEAVVKDLINEG
HAATQLVNQFHDVVVENDDLSDKQKSIITEKLAEVDKCLADGADEHLQLISLCATVMQQL
TRNC
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgcaggcatttctaaaaggcacatctatcagcactaaaccaccactgcccaaggatcga
ggggcagctgccactgctggaagcagtggcgagaataagaaagccaaacctgttccatgg
gtggaaaaatatcgcccaaaatgtgtagatgaagttgctttccaggaagaagtggttgca
gtgctgaaaaagtctttagaaggagctgatcttcctaatctcttgttttatggaccacct
ggaactggaaaaacatccactattttggcagcagctagggaactctttgggcatgaactt
tttcgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaagtaattaga
gagaaagtgaagaattttgctcaattaactgtttcaggaagtcgttcagatgggaagcca
tgtcctccttttaagattgtgattctggatgaagcagattctatgacctcagcggctcag
gcagctctaagacggaccatggagaaagagtctaaaaccacccgattctgtcttatctgt
aactatgtcagtcgaataattgaacctctgacatctagatgttctaaattccgcttcaaa
cctctgtcagataaaattcaacagcagcgattactagacattgctgataaagaacatgtc
aaaattagcagtgagggagtgtcttgtcttgttaaagtatcagaaggagacttgagaaag
gccattacatttcttcaaagtgctactcgactaacgggtgggaaggaggtcacagagaaa
gtgatcacagacattgctgggatgataccagctgagacaattgatggagtatttgctgct
tgtcagagtggctcttttgacaaactagaagctgtagtaaaggacttaataaatgagggt
catgcagcaactcagcttgtgaatcaatttcatgatgtagttgtagaaaacgacgacctt
tccgataaacaaaagtccattattacagaaaaacttgctgaagtagataaatgcttagca
gatggtgctgatgaacatctgcaattgattagcctctgtgccactgtgatgcagcagtta
actcgaaattgttaa

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