Sturnira hondurensis: 118979869
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Entry
118979869 CDS
T07222
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shon03036
]
118979869 (SHOC1)
Chromosome and associated proteins [BR:
shon03036
]
Eukaryotic type
Meiosis-specific proteins
Others
118979869 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
118979869
NCBI-ProteinID:
XP_036892052
LinkDB
All DBs
Position
Unknown
AA seq
1416 aa
AA seq
DB search
MFSIFKYCAIDYLYENVVRKKFCRDTLLLRLPSCLSQDGNYHAQVIDNTFRRPWTRVSAV
SVWGMTDSSILDQWKASLDVEDFLEKKTITGMVTQTNCEFEEIVPSSNPNSQTEFEEASL
HAYKDYSEVFTPIRCSGKWPEFQGQIQDLLLDHEEILFVDNLTAYKSYLSTSHTLLSEIK
PFLLEDPPLDFKEQIFIEANFFRECFSYQGAVKDLIKEDFYIDRENFCREELDDTPLFLL
DYEVLPPTFKQEVDIPSFSELKELLNLMPEIINYEDENENLFKRDVTTDYGIDIEHIKCS
STDILAIESHYEPESYEPEELEEELEVPLSPLHLTNQHSSVNSLCTELQTFPFSPVCKIG
RGEEEGREHTSQDLNSFLLPAWLDHKSCSSSTALTDEDSTNNNLSFPQKSPSPGKEVPDL
CFSDECISVKSPTKEKPKDDQELVYRLIQNKESKDCLELDCTVQSTGSSSNIEKASFKHG
KKRENDLDLLNDFIMMRNKHEICTSNPEVTDSDEKDEFQNKEDTLTPQEETPIVCTNKTP
EKINHERGADNVIEIQASESQCQAYCILEAAATPILKKLGCLCTPSVANWKFATVIFDQT
RFLLKEQEKVVSDAIHQGTDDEREMTFKQAGLLHLLVTIRDILLTCSLDTALGYLSNAKD
VYKSILASYLDDIWRQLEIVQFIKGKKPETNYKIQELQCQILNWMQSEEQIKVLIIIRMD
SDGEKHLLIEILNKMEGLTLTVLHSSKRRDYLESEGILDGTSSCVVVHNQYIGADFPWSN
FSFVVEYNHGENSCWTKHCEKLNIPFMAFKVILPDTVLKRSNLPDSFGGFLLDIQIPYVF
FASEGLLNTPEILQLLESNYNITLVERSCSESLKCFGGTECCVVMTVDEHTAIILQDLEE
LNCEKASDNIIMRLMALSFQYSSCWVILYARKTLSSEYYLTEKTLHHLALIYAALVSFGL
KSEELDVKLVIAPGVEETALIIRQIADHNLMTSKRDPHEWLDKSWLQVSPSKEEMYLLDF
PCISPLVAQLMLNKGPSLHWILLATLCQLQELLPEVPEKVLKHFCDITSLFKISSSSSPQ
ISSPQENTNQTRTFPSQSSASDSSHSVIQEHTEYCQYPDLEETVQKDTNTTSDYNSPFAG
LRERERPCVLPSVTSCRWTSYWKDSSCNPDIIQNNPFLINMESRNSARNSFLNHNDSQTD
VFSLGLTQMNCETRISPINTQKRVAPNFINSQQKGTHEAKRPVNKEVSAPMFSLEYSQPP
AHWNYKKNVWEQENHSFNLQYSAEQTMCDKGYPQKEHLYAIQQKCLSNELESSTGKSSNA
GTQETFWKELLSVPSLDLFCSSDSDVNQKEFHSLYFHQRDGTCLGQKRHAEFSSNSGDQK
SLTESTCSQRPQSKKQRLVYEKVPGRVDGQTRLRFY
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaatattcaaatattgtgcaatagattatttatatgagaatgtagttagaaag
aagttttgcagagatactttattgcttcgactcccttcatgtttatctcaagatggaaat
taccacgcacaagttattgataatacgtttaggaggccatggacaagagtctcagctgtg
tcagtttgggggatgacagatagctcaatcttggatcaatggaaagcaagcctcgatgtg
gaagacttccttgagaaaaagacaattacaggaatggtgactcagactaactgtgaattt
gaagaaattgttccaagttcaaatccaaactcccaaactgaatttgaggaagccagcttg
catgcttataaggactacagtgaagtctttacacctattagatgttcaggaaaatggcca
gaatttcaaggacagatccaagatttgttattggatcatgaagaaatactttttgtagat
aatttgactgcctataaaagttatctatcaacatcgcatactttgttgagtgagataaaa
ccatttttgctagaagacccccctttagacttcaaagaacagatctttatagaagctaat
tttttcagggaatgtttctcctaccaaggagctgtgaaagatcttataaaagaagatttt
tacatagatagagagaacttttgtcgggaggagctagatgatacgccattatttttgctt
gactatgaagtactacctccaactttcaaacaagaagttgatattccatcattttcagaa
ttgaaggagttattaaacttaatgccagaaataataaattatgaagatgaaaatgaaaac
cttttcaaaagagatgttaccactgactatggaattgacattgagcatataaaatgcagc
tccacagacattttggccattgaaagccattatgaaccagagagctatgaaccagaagaa
ttagaagaagagttagaagtgccattatctcctctacacctaacaaaccaacattcttct
gtgaattcattatgtacagaacttcagacatttccattttctcctgtttgtaaaataggg
aggggagaagaagaaggaagagaacataccagccaggacttgaactcgtttttgcttcca
gcatggctagaccataaaagttgttcctcatctactgcacttactgatgaagattctaca
aataataatttatcatttccacaaaaaagtccatctccaggaaaagaagtaccagacttg
tgtttttctgatgaatgtatctctgttaaaagtccaacaaaagaaaaaccaaaggatgat
caagaactagtttatagactaatccaaaataaagaaagtaaagattgcttggaacttgat
tgcacagtacaatccactggatcatcttcaaacattgaaaaagcttctttcaaacatggt
aaaaaaagggaaaatgacttggacctgttgaacgactttattatgatgcgaaataaacat
gaaatttgcacttcaaaccctgaagttacagatagtgatgaaaaagatgaatttcaaaat
aaagaagatactttgactcctcaagaagaaactcctattgtttgtactaataaaactcca
gagaaaataaatcacgagaggggagcagataatgtcattgagattcaagcatcagagagc
cagtgccaagcatattgtatcctcgaagcagcagctactcctatcttaaaaaaacttgga
tgcctctgtactccctctgttgctaattggaaatttgccactgttatttttgaccaaaca
agattcctcttaaaggaacaagaaaaagtagtaagtgatgctattcatcaaggtacagat
gatgaaagagaaatgacgttcaagcaggcgggtctcttacaccttctggtcacgattcgt
gatatccttttaacatgtagcttggacacagcattgggatacttgtcaaatgcaaaagat
gtgtacaaaagcattttagcttcctatttggatgacatttggagacagctagagattgta
caatttattaagggaaaaaagcctgaaaccaactacaaaatacaagaattacaatgtcag
atactaaattggatgcaaagtgaagaacaaattaaggtgctgattataataagaatggac
tcagatggtgaaaaacatttactcattgaaatccttaacaaaatggaaggtttaacattg
actgtcttacattcaagcaaaagaagagactatctggaatctgaaggtattttagatggt
acaagttcctgtgtagtagtacataatcaatatattggagcagatttcccctggagtaat
ttctcatttgtggtggaatacaatcacggagaaaactcttgttggactaaacactgtgaa
aaattgaatattccattcatggcctttaaagtgattcttccagacacagttttaaagaga
agcaatttgccggatagttttggtggttttcttttggatattcagattccatatgtgttt
tttgcatctgaaggacttcttaatactccagaaatacttcagttgcttgaatccaactat
aacatcaccctagtggagagaagctgcagtgagtcgctgaaatgctttggagggacagag
tgctgtgtagtaatgacagttgatgaacacactgccataattttgcaggacctagaagaa
ctgaattgtgaaaaggcgtcagacaacatcattatgagactgatggcattgtcattccag
tacagttcttgttgggtgattttatatgccaggaaaacgttaagctcagagtactatctt
acagaaaagacacttcatcacctagcactgatttatgcggctttagtttcatttgggcta
aaatcagaagaactggatgtaaagcttgtaattgcccctggagtagaagagactgcattg
ataattcgacaaattgctgaccacaatttaatgacctcgaagagagatcctcatgaatgg
ttggataaatcctggcttcaagtttcaccatctaaggaggaaatgtatttacttgatttt
ccatgtattagtccattggtggctcagctcatgttaaataaaggaccttctcttcactgg
atattattagcaactctttgtcagcttcaggaactcctacctgaagttccagaaaaagtg
ttaaagcatttctgtgacatcacttccttattcaagattagttcttcttcatcacctcaa
atttcatcacctcaggaaaatacgaatcagaccagaacctttccttctcagagttcagct
tctgactcttcacactctgtcattcaagaacatactgaatattgccagtacccagactta
gaagagacagtgcagaaagacacaaacaccacttcagattacaactctccctttgcggga
ctaagggaaagagaaaggccatgcgttttaccatctgtgacttcttgcagatggaccagc
tattggaaagactccagttgtaatcctgacataatacagaataatcccttcctaattaat
atggaatcaaggaactcggctcgtaactcctttctaaaccacaatgattcacagacagat
gtcttttctttgggtctaacacaaatgaattgtgaaaccagaatatcaccaatcaacact
caaaagagagttgcccctaattttataaattctcagcaaaagggaacacatgaagcaaaa
agacctgtaaataaagaagtatctgcccctatgttttcattagaatactctcaacctcct
gctcattggaactataagaagaatgtatgggaacaagagaatcactctttcaatttacaa
tacagtgcagagcagactatgtgtgacaaagggtaccctcagaaagaacacctgtatgct
attcagcaaaaatgtctatccaatgagttagaaagctccacaggcaaaagctcaaatgct
gggactcaagagactttctggaaggaattactatctgtccccagtttggatttattttgt
tcttcggattctgacgtaaatcaaaaagaattccacagtctttatttccaccaaagagat
ggaacatgtttaggacagaaaaggcatgctgaattttcatctaactcaggagaccagaaa
tcattaacagagtccacgtgttcacaacgaccacaatccaaaaaacagcgtctagtgtat
gaaaaagtccctggtagagtcgatggacaaactcgtctgaggttttattga
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