Sturnira hondurensis: 118981841
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Entry
118981841 CDS
T07222
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
shon
Sturnira hondurensis
Pathway
shon04140
Autophagy - animal
shon04211
Longevity regulating pathway
shon05010
Alzheimer disease
shon05014
Amyotrophic lateral sclerosis
shon05016
Huntington disease
shon05017
Spinocerebellar ataxia
shon05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118981841 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
118981841 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
118981841 (RB1CC1)
05014 Amyotrophic lateral sclerosis
118981841 (RB1CC1)
05016 Huntington disease
118981841 (RB1CC1)
05017 Spinocerebellar ataxia
118981841 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
118981841 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shon01009
]
118981841 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shon04131
]
118981841 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
shon03029
]
118981841 (RB1CC1)
Protein phosphatases and associated proteins [BR:
shon01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118981841 (RB1CC1)
Membrane trafficking [BR:
shon04131
]
Autophagy
Autophagosome formation proteins
ULK complex
118981841 (RB1CC1)
Mitochondrial biogenesis [BR:
shon03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118981841 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
Metal_resist
Jag_N
Motif
Other DBs
NCBI-GeneID:
118981841
NCBI-ProteinID:
XP_036894554
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHNKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCELPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLSSFCESLVHDEHLQHQGWAAIMANLEDCSNSYQKLLVKFENMYSHYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLERLDSLPEREGSEKPAMKTSTEL
VLSPDMPRTTNKSLLTSFPKSVEHVAPDTTDAESGKEIREPCQSTAQQEETSIDAKERDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIVECRQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELATNLHVRLKWCCFVMLHADQDGEKLQALLRLVVELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASMSQTSPQSASSPRRESATE
ITTTTSPKTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTN
VCGKEDLGDRVSLNVQLEKCRIIAQDSQFTIQTIKKDLCHFRTYVQKEQCDFSNSLKFTA
TEIRNIIEKVKYSVEVTLNEKHQKELQSLKSEYESKLDALIKESEENKNKIKKLKGDLVC
LEEVLQNKDNEFALVKNEKEAVICLQNEKDQKLLEMESTIHTQNCEIKELKESREIALED
LRKIHVENDEKIQLLRTELQNLEQSHLKELEDTLHVRHKQEFEKVMTDQKVSLEKLQNEN
QQTINQIQESHATIIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEES
RAQQNETLKSLLEQETENLRAEISKLNQKIQDNNENYQIGLAELRTLMTIEKDQCISELI
SKHEEESNMLKAELNQVTSLYRQAFEIEKNLKEEIVELQSKLDSALSALEKQKDEKITQQ
EERYETIIQKLEKDKEKLVMNQEQEREELIQKLNCEKEKAIQNALKEFKLEREAVEKELL
EKVKHLENHIAKSSAIESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEE
KKKLEEELSKLHGSSFVPSPYVPTAPELLDEACAPELPGESERSAIETQDEGRVDSAMDT
SMMSVQENIPMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRD
FQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVM
EKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggttaacactggcactaccctaacatttgacactgaactt
acagtgcaaactgtggcagatcttaagcatgctattcataacaaatacaagattgctatt
cagcaccaggtgttggtggtcaatggaggagagtgtatggctgcagatagaagagtgtgc
acctacagtgctgggacggacacaaatccaatttttctttttaacaaagaaatgatctta
tgtgaacttccacctgctattcctaaaactaccttttcaacagaaaatgacatggaaata
aaagttgaagagtctcttatgatgcctgcagtttttcacactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaaacttagctccttctgtgaaagtctggtc
catgatgagcaccttcaacaccaaggctgggctgcaatcatggccaatctggaagactgt
tcaaattcataccaaaagctacttgtcaagtttgaaaatatgtattcacattacctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcggtttcagtaatggcc
aagattccgctgttggagtgcctaaccagacatagttacagggaatgtttggaaagactg
gattctttacctgaacgtgaaggctcagagaaacctgcgatgaaaacctccactgaactg
gtgctgtctcctgatatgcctagaacaactaacaaatccttgttaacctcatttcccaag
tcggtggaacatgtagctccagataccacagatgctgaaagtggaaaagaaattagggaa
ccttgtcaaagtactgctcagcaggaagaaacttcaatagatgctaaagaaagagatctt
cctttttttaatgtttctttgttagactggataaatgttcaagatagacctaatgatgtg
gaatcattggttaggaagtgctttgattcaatgagcaggcttgatccaaggattattcga
ccatttatagtagaatgccgtcaaactattgccaaacttgataatcagaatatgaaagcc
attaaaggactcgaagatcggctgtatgccctggatcagatgattgctagctgtggccga
ctggtgaatgagcagaaagaacttgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcgtctgtattacctgatttatgcctcagtcatgcaaatcagttgatg
attatgttgcaaaatcatagaaaactgttggatattaaacagaagtgtaccactgccaaa
caagaactagcaactaatctacatgtaagactgaagtggtgttgctttgtaatgcttcat
gctgatcaagatggagagaaattgcaagctttgcttcgcctcgtagtagagctcttagaa
agagtcaaaattgttgaagctcttagtacagttcctcagatgtactgcttagctgttgtt
gaagttgtaaggagaaagatgttcataaaacactacagggagtgggccggtgctttagtc
aaagatgggaagcaattatatgaagctgaaaaatcaaaaagggaatcatttggaaaatta
tttaggaagtcttttttaagaaatcgtctgtttagaggattggactcctggcccccgtcc
ttttgtacacagaaacctcgaaagtttgactgtgagcttccagatatttcattaaaagat
ttacagtttctgcaatcattttgtccttcggaagttcagccattcctcagggttccctta
ctttgtgactttgaacctctacaccagcatgtacttgctctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctactgagtgaacaaaaggca
tccatgagtcagacatccccacagtcagcttcctcaccaaggagagaaagtgcaacagaa
attacaactactacctcaccaaaaacgccccctccgctcactgtgcaggatcccttatgt
cctgcagtgtgtcccttagaagaattgtctccagatagcattgatgcacatacatttgat
tttgaaactatcccccatccaaacatagaacagactattcaccaagtttcattagacttg
gattcattagcagaaagtcctgaatcagattttatgtctgctgtgaatgagtttgtaatc
gaagaaaatttatcatctcctaatcctataagtgatccacaaagtccagaaatgatggtg
gaatcactttattcatcagttatcaatgcaatagatagtagacgtatgcaggatacaaat
gtatgtggtaaagaggatttaggagatcgtgtttctctaaatgtccaattggaaaaatgt
aggattattgcccaagactcccagttcactatacaaaccatcaagaaagacctctgccac
ttcagaacatatgtacaaaaagaacagtgcgacttctcgaattctttaaagtttacagca
acagaaataagaaacattattgaaaaggtaaaatattctgtggaagtaacactaaatgaa
aaacatcaaaaagaactacagtctttaaaaagtgaatatgaaagcaaacttgacgcacta
ataaaggagagtgaagaaaacaaaaacaaaattaaaaagcttaaaggagacttagtatgc
ctcgaggaggttttgcaaaataaagataatgaatttgctttggttaaaaatgaaaaagaa
gctgtcatctgcctgcagaatgaaaaggaccagaagttgttagagatggaaagtacaatt
catactcaaaattgtgaaattaaagaactcaaagagtcacgagagatagcattagaagac
ttaagaaagatccatgttgaaaatgatgagaagatccagttgttgaggacagaacttcag
aacttagagcaaagtcatttaaaggaattagaggacactctgcatgtcaggcacaaacag
gagtttgagaaagttatgacagaccagaaagtttctttggagaaattacaaaatgaaaat
caacaaacaatcaatcagattcaagagtctcatgccacaattattcaggaaaaagaacaa
cagctacaggagttaaaacttaaggtgtctgatttgtcagacatgagatgtaagttagag
gttgaacttgcattgaaggaagcagaaactgatgaaataaaaattttgctagaagaaagc
agagcccagcagaatgagaccttaaaatctctccttgaacaagagacagaaaacttgaga
gcagagataagtaaactaaaccaaaaaattcaggataataatgaaaattaccagataggc
ttagcagaactaagaactttaatgacaattgagaaagatcagtgtatttcagagttaatt
agtaaacatgaagaagaatctaatatgcttaaagctgaattaaaccaagtaacatcattg
tatcgccaagcatttgaaatagaaaaaaacctgaaagaagaaatagttgaactgcagagt
aaattggactcagcattgagtgctcttgaaaaacaaaaagatgaaaaaatcacccaacaa
gaagaaaggtatgaaactatcatccagaaacttgagaaagacaaagaaaaattagtcatg
aaccaggaacaggagagagaagagttaattcagaagcttaattgtgaaaaagaaaaagct
attcagaatgccctaaaagaatttaaattggagagagaagctgttgagaaagagttacta
gaaaaagttaaacatcttgagaatcacatagcaaaaagttctgctattgaatctgccaga
gaagattcttcaagtctagttgctgaacttcaagaaaagcttcaggaagaaaaagctaag
tttttagaacaacttgaagaacaagagaaaagaaaaaatgaagaaatgcaaaatgttcga
acatctttgattgctgaacaacagaccaattttaacacagttctaacaagagagaaaatg
agaaaagaaaatataattaatgatctgagcgataagttgaaaagtacaatgcaacagcaa
gagcgagataaagatttgatagagtcactatctgaagatcgagctcgcttgcttgaggaa
aagaaaaaacttgaagaagaactcagtaagttgcatggtagcagtttcgttccttcacca
tacgtacctacagctccagaacttcttgatgaagcttgtgcacctgaactcccgggtgaa
tcagagagatcagccattgaaacacaagatgaaggaagagtggactcggcaatggacaca
agcatgatgtctgtacaagaaaacatccctatgctatctgaagaaaaacagaggataatg
ctgttagaacgaacactgcaattaaaagaagaagaaaacaagaggttaaatcaaaggctg
atgtctcagagcatgtcttcagtatcctcaaggcattctgaaaagatagctattagagat
tttcaggtgggagatttggtactcatcatcctagatgaacgccacgacaattatgtatta
tttactgttagtccaaccttatattttctgcattcagagtctctgcctgcgctggatctc
aaaccaggtgagggtgcttcaggtgcatctagaagaccttgggttcttggaaaagtaatg
gaaaaggaatactgtcaagccaaaaaggcacaaaacagatttaaagttcctttggggaca
aaattttacagagtgaaagctgtgtcatggaataagaaagtataa
DBGET
integrated database retrieval system
