Sturnira hondurensis: 118982782
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Entry
118982782 CDS
T07222
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
shon
Sturnira hondurensis
Pathway
shon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118982782 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shon03019
]
118982782 (CLP1)
Enzymes [BR:
shon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
118982782 (CLP1)
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
118982782 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
ATP_bind_1
TniB
MMR_HSR1
AAA_22
AAA_16
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
118982782
NCBI-ProteinID:
XP_036895841
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYH
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDVEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggaagccaatgatgacaagaaaccaacaactaaatttgaactagagcgagaa
acagaacttcgctttgaggtggaagcatctcagtcagttcagctggagctgctggctggc
atggcagaaatctttggcacagaactgacccgaaacaagaaattcacctttgatgctggt
gccaaggtggctgttttcacgtggcatggctgttctctacagctgagtggccgcaccgag
gtggcttatgtctctaaggacacccctatgttgctttacctcaacactcatacagctttg
gagcagatgcggaggcaggcagagaaagaagaagagcgaggcccccgggtgatggtagtg
ggtcccactgacgtgggcaagtccacagtgtgccgtctgttgctcaactatgcagtgcgt
ttgggtcgccgtcccacttatgtggagctggatgtgggccagggctctgtgtctatccct
ggtaccatgggggccctctacattgagcggccagcagatgtcgaagagggattctccatc
caggcccctctggtgtatcattttgggtccaccactcctggcaccaacatcaagctttat
aataagattacatctcgcttagcagatgtgttcaaccaaaggtgtgaagtgaaccgaagg
gcctctgtgagtggctgtgtcattaacacctgtggctgggtcaagggctctggctaccat
gccctggtgcatgcagcctcagcctttgaggtagatgtagttgtggttctagatcaagaa
cggctgtacaatgaattgaaacgggacctgcctcactttgtacgcactgtgctgctccct
aaatcagggggtgtggttgagcgctccaaggacttccggcgagaatgtagggatgagcgt
atccgtgagtatttctatggattccggggctgtttttatccccatgccttcaatgtcaaa
ttttcagatgtgaaaatctacaaagttggggcacccaccatcccagactcctgtttgcct
ttgggcatgtctcaggaggacaatcagctcaaactagtacctgtcactcctggccgagac
atggtgcaccacctcctgagtgttagcactgccgagggcacagaggagaacctttctgag
accagcgtggctggcttcatcgtggtgaccagtgtggatgtggagcaccaggtgtttacc
gttctctctccagccccccgtccactgcctaagaactttcttctcatcatggatatccgg
ttcatggatcttaaatag
DBGET
integrated database retrieval system
