Sturnira hondurensis: 118984273
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Entry
118984273 CDS
T07222
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
shon
Sturnira hondurensis
Pathway
shon03013
Nucleocytoplasmic transport
shon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118984273 (UPF3A)
03015 mRNA surveillance pathway
118984273 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shon03019
]
118984273 (UPF3A)
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118984273 (UPF3A)
mRNA cycle factors
P-body specific factors
118984273 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
118984273
NCBI-ProteinID:
XP_036897999
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MRSEKEGASGPGVAVAVRGQSGRERTSAVEVQFRRESPRREAGAPPALSSSCGGSASKPR
EEKRTVLSKVVIRRLPPSLTKEQLEEHLHPLPAHDYFEFFTADLSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFIDNKGLEYPAVVEFAPFQKIAKKKLKKKDTKTGSIDNDPEYKKF
LETYFVEEEKTSANPETLLGDIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERR
RRELEKKRIREEEKRKRREEEKCKRKETEKQKKTAEKEVRIKLLKKPEKGEEAATEKPKE
PGEEVDAGDGHWDACPGCAVGKAKPWDSLPEERREKSQNDSEKEQKETERKFREKELETQ
KYHLDDSRKLRAHCESDKFPRRSEEEMELGKGFTSDRGKAGSQDRGIPVEAPERPGRGQK
SEDGLALRKASVRNKDRPSLPLYQPGARIRARECGGRFSEEGRAGRRAEVEDSTGAGSKK
SKEVE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggagaaggagggggcctccggccccggggtggccgttgctgtgaggggccag
agcgggagggagaggacttcggctgtggaagttcagttccgccgggagtctccacggaga
gaggcaggggcaccgccagccttgtcctccagttgtgggggcagcgcaagcaaacctcgc
gaggagaagaggaccgttctgagcaaggtggttatccggcgccttccccccagcctcacc
aaggagcagctggaagagcatctgcacccgctccccgcacacgattactttgagttcttt
actgcggatctcagtctttatcctcatctctactcaagagcatacattaattttagaaat
cctgatgacattcttctttttagagatcgttttgatggatatatcttcattgacaataaa
ggcctagaatatcctgcagtggtagagtttgctccattccagaagatagcaaaaaagaag
ctaaagaaaaaagataccaagactggaagcattgacaatgatccagaatataagaagttt
ttagaaacttactttgtggaggaagaaaaaactagtgccaatcccgaaactcttctgggg
gacatagaggcaaagacaagagaacttattgctagaagaaccacacctcttttggaatac
attaaaaacaggaaattagaaaagcagagaattcgagaagagaagcgagaagaacgaagg
cgaagggagttggaaaagaaacgcatacgggaagaagaaaaaagaaagcgaagagaagaa
gaaaaatgtaagagaaaagaaacagaaaaacaaaagaaaactgctgagaaagaagtaagg
attaagcttcttaagaaaccagaaaagggagaggaagcagccactgagaaaccaaaagaa
ccaggagaggaagttgatgctggagacggacactgggacgcctgtcctggctgtgccgtc
gggaaggccaagccctgggacagcctgccggaggagcgcagggaaaagtcacaaaatgac
agtgaaaaagagcaaaaggaaacagagagaaaatttcgagaaaaagaacttgaaacacaa
aaataccacttggatgacagcagaaagcttagagctcactgtgagtctgacaagtttcca
agaaggagtgaagaagagatggaattggggaaaggattcacctcagacagagggaaggca
gggagccaggaccggggcatccctgtggaagcaccagagagaccagggaggggacagaag
agtgaggatggcctggccctcagaaaggcgagcgtgcgaaacaaggaccggccatccttg
ccgctgtaccagccaggagctcgcataagagcacgcgaatgtggtggaagattctctgag
gagggtcgtgctgggaggagagctgaggtagaagattcgacaggggctggttccaagaag
agcaaagaggtggaatga
DBGET
integrated database retrieval system
