Sturnira hondurensis: 118984309
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Entry
118984309 CDS
T07222
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
shon
Sturnira hondurensis
Pathway
shon03015
mRNA surveillance pathway
shon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118984309
09123 Folding, sorting and degradation
03018 RNA degradation
118984309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shon03019
]
118984309
03041 Spliceosome [BR:
shon03041
]
118984309
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118984309
mRNA cycle factors
Stress granule specific factors
118984309
Spliceosome [BR:
shon03041
]
Complex C
Other components
Complex C specific factors
118984309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_occluded
RRM_5
RRM_3
POP1_C
Motif
Other DBs
NCBI-GeneID:
118984309
NCBI-ProteinID:
XP_036898054
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MTFLLRFFKNETNLLITFLRNETNRPSPRAQPRRPDRGPRSSCEKEATERPRDRGLPAAQ
TDQRPRSPARHRGRLTPGRNTPPPSLPAVAHSQRPAAADRPCSAAVEYVAFSPGGLASRW
PRFPQPTRLFPSPTPLPLPHPSAPPPPSLSLLPPPFPFPTLRPRPWSSHELPSSGEAVAC
GPAGSLAEMHAGAPSHSPSTLYVGNLHWDVTERMLYNKFSPAGPILAVRICRDRITRRSL
GCAYVCFQQPADAERALETMNFDIVKGNPLRLMLCQRDPLLGKSGVGNIFIKNLDKAIKK
RALYDTFAAFGNILSCKVVCDENRSKCYGFVHFETEEAAERSVEKMNGMLLNDHKIFVGQ
YKAPKEREMDLEANTEEFTNVCIKNLGEDMGDEQLKDLFGKFGPVLSVKVMADESGKSKG
FGFVSFKRHEDAQKAVDEMNGKELSGKPIYVGQAQKKVERRAELKRQLEEKRQDKVSRYQ
GVNLYVANLDDHIDDERLRKEFSPFGTITSAKVMTKGGRSQGFGFVCFSSAKEASKAATE
MNGRIVATKPWYVALAPCKEKRQAHLTNKYMQRLTSATAMLTPKINPYQLAADPLTQNRA
AYSPPSQMAQRRPSPHWTAQGARPRPFPNMPSAIHPAAPGPPLSTMKPASSQVPRVMSTQ
RVANTARKTVGSHPAAAAAAATSPVCTVPPCKHASGVLNPQHLNAQPRVTMLKLAVHKQG
QEPLTASMLASAPPREQKQMLGEQLFPFIQAMQPTFAGKITGMLLEISNSELLRMLESPE
SLRSKVDEAVAVLQAHKR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcttgctgaggttctttaaaaatgaaactaatctcttgataacattcttgaga
aatgaaactaaccggccttcccccagggcgcagccgagacgaccggaccgcggccctcgc
agcagctgcgaaaaggaagctacggagcgaccccgcgaccggggcctccccgctgcccag
acggaccagcgccctcgctccccagccagacaccgaggccggctcactcccgggaggaac
accccgccaccctcgctcccggcggtagcccacagccagcgaccagcggcggcggaccga
ccctgctcggcggctgttgagtacgtagctttctctcccggtgggttagcgtcccgctgg
ccccggtttccccagccaactcggctctttccctccccgacccctctgcccctcccccac
ccctctgcccctcccccaccctctctttcccttctcccccccccctttcctttccccact
ttgaggcccaggccctggtcctcacacgagctcccctccagcggagaggccgtggcctgt
ggccctgcaggcagccttgctgagatgcatgccggcgcccccagccactcgccttccacg
ctctacgtggggaacctacactgggacgtgacagagaggatgctctacaacaagttcagc
cccgcgggacccatcctagccgtccgaatctgcagggacaggataacccgtcgctccctg
ggctgcgcttacgtgtgcttccagcagccagcagacgctgagcgtgctttggagaccatg
aattttgatattgtgaagggcaacccacttcgccttatgttatgccagcgagatccactg
cttggcaaaagtggagtgggcaacatattcattaaaaatttggacaaagccattaaaaaa
agagcactgtatgatacatttgctgcgtttggtaacatcctttcatgtaaggtggtttgt
gacgaaaatcgttccaagtgttacggatttgtacattttgagacagaggaagcagctgaa
cgatctgtggaaaaaatgaatgggatgcttctaaatgatcacaaaatatttgttggacaa
tataaggctcctaaagaacgagaaatggaccttgaagctaatacagaggagttcaccaat
gtttgcatcaagaatttgggggaagacatgggtgatgagcaacttaaagatctctttgga
aagtttggacctgtcttgagtgtgaaagtaatggcggatgaaagtggaaaatccaaaggt
tttggattcgtgagcttcaaaagacatgaagatgcacagaaagctgtggatgagatgaat
ggaaaggaactcagtggaaaaccaatttatgtcggccaagctcagaagaaagtggaacgg
cgggcagaacttaagcgccaattggaagagaagaggcaagacaaggtcagcagataccag
ggtgttaacctctatgtggcgaatcttgacgatcatattgatgatgaacgtctccggaaa
gagttctctccatttggtactatcactagtgccaaggttatgacgaagggtggtcgcagc
caagggtttggttttgtatgtttctcctcagccaaagaagccagtaaagcagctacagaa
atgaatggaagaattgtggctaccaagccatggtatgtagctttagctccgtgcaaagaa
aagcgccaggctcatctcactaacaagtatatgcagagactgacgagtgcgacagctatg
ctcactcccaaaatcaacccctatcagctggcagctgacccactgactcagaatcgggct
gcatactcccctcctagccaaatggctcaacgaagaccaagtcctcactggactgctcag
ggtgccagacctcgtccattcccaaacatgcccagtgccatccacccagctgctcctgga
ccaccacttagtactatgaaaccagcttcttcacaggttccacgagtcatgtccacacaa
cgtgttgctaacaccgcaagaaagacagtgggttcacatcctgcagctgctgctgctgct
gctacttctcctgtctgcactgttccaccgtgcaaacatgcttcaggagttctcaatcct
caacatcttaatgcacagccacgagttaccatgctgaagcttgctgtgcacaaacaaggt
caggagcctctgactgcttccatgttggcatctgcccctcctcgagagcaaaagcaaatg
ttaggtgaacagctttttcctttcattcaagccatgcagcctacttttgctggtaaaatc
actggcatgttgttggaaatcagtaattcagaacttcttcgtatgcttgagtctccagag
tctctccgttctaaagtggatgaagctgtagctgtactacaagcccacaaacgttaa
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