KEGG   Sturnira hondurensis: 118984975
Entry
118984975         CDS       T07222                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
shon  Sturnira hondurensis
Pathway
shon03013  Nucleocytoplasmic transport
shon05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:shon00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118984975 (NDC1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    118984975 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shon03019]
    118984975 (NDC1)
Messenger RNA biogenesis [BR:shon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     118984975 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 118984975
NCBI-ProteinID: XP_036899117
LinkDB
Position
Unknown
AA seq 776 aa
MQRHRPQFLGPRWTLLRRDLFDTRRRILESRAAFGQVSPGQFLSAGPVQTKPRRNGLGPG
PGFAQAAFEAAPTGSSRGLPPFEPQWRAGSQCPASLKVGAAITMATVATQPCAGGSRDIL
WRVLGWRIVSSVVWSVLLLPICTTVFIVLSSIDLFHPIQWLSDSFNDLYSSRVIFYLLLL
SVVIIIISIFNVEFYKVVPSVPCSRLALVGKVVHPPQLLHSFVHAAMGMMVAWCAAVMAK
GRYSFLVVPCTRTESLDGPTAQTCLNEYHLFFLLAGAFMGYSYSLLYFINNMDYLPFPII
QQYKFLRFRRSLPLLVKHSCMESLFLIRNFCIVYYFLGHIPKAWISTAMDLQVDEQFHRP
LDTVSGLLNLSLLYHVWLCGVFLLTTWYISWILFKIYATEAHLFPVQPPFAEESDECLPK
VLNSSPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNDMT
QKLVLHQEAAATNGRVMSSSYTVEPKKANSPEETTFLTPTSSQMPRPSMTPLIKTSLLSS
KLSTPGVASPLGSPFGSSVVNRMAGIFDVNTCYGSPQGSQLVRRGPRLWTSASDQQMNEL
SNFPSTLSAEGKTVRQPSVIYSWIHNKHEQIKNFLSKRVLIMYFFSKHPEASIQAVFSEA
QMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRT
SGTLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgcagcggcaccgcccccaatttctggggcctcgctggaccctgcttcggagggacctt
ttcgataccagaaggcgaattctggagtccagggccgcttttggacaagtgtctccaggg
caattcttgtctgctgggcctgtccagacgaaacctcgaaggaatggattggggcctggg
ccgggcttcgctcaggcggcgttcgaggcagcccctacggggtcctcccggggccttcct
ccctttgaaccacagtggcgggcgggctcacagtgtccagcatccctcaaagtaggggcc
gccatcaccatggccacggttgcgactcagccctgcgccggcgggtcgcgggacatcttg
tggcgcgttttgggctggaggatagtttcaagtgttgtctggtcagtgctgcttctaccc
atctgtaccacagtatttatagtcttaagcagcattgatttatttcatcctatacagtgg
ctgtctgattctttcaatgatctgtatagttcccgtgtaatcttttatctcctgctgctg
tcagtggtaataataataataagtattttcaatgtggaattttataaagttgtgccttcc
gtcccctgctccagactggcactggtggggaaggtcgtccatcctccgcagcttctgcac
tcgtttgttcacgctgcgatgggaatgatggtggcttggtgcgctgcggtgatggccaag
ggccggtacagtttcctcgtggttccctgcactcgtactgagagcttagatggccctact
gcacaaacctgcttaaatgaatatcatctgtttttcctacttgctggagcatttatgggc
tatagttatagcctcctttattttattaacaacatggactatcttccatttcccatcata
cagcaatacaagttcttgcgctttaggagatctttgcccttactagttaaacacagttgt
atggaatcactgttcctgattagaaatttctgcattgtgtattattttcttggccatatt
cccaaagcttggattagcactgctatggaccttcaagtagatgagcaatttcataggcct
cttgatactgtgagtggcctcttgaatctctcattactctaccacgtctggttatgtgga
gtctttctcctgacgacttggtacatctcatggatactcttcaaaatctatgctacagag
gctcatctgttccctgttcagccaccatttgcagaagagtcagatgaatgcctcccaaaa
gttttaaacagcagtcctcccctcattataaagtatttggccttgcaggacctgatgttg
ctttctcaatattctccttcacgaagacaagaagtttttagtcttagccaaccaggtgga
cacccccacaattggacagccatttcaagggagtgtttaaatcttctcaatgatatgact
cagaagctggttctccaccaagaagctgctgctaccaatggaagggtaatgtcttcatca
tacactgtggaacccaagaaagcgaattctccagaagaaactacatttttgacccccacg
tctagccagatgcctcggccttcaatgacaccgttaattaagacatcactgttgtcttcg
aaattatctacacctggtgttgccagcccccttggatctccatttggctctagtgtagtg
aatcggatggctgggatttttgatgtaaacacctgctatggctcacctcaaggttctcag
ctagtaagaagagggccacgattatggacttctgcttctgaccagcaaatgaatgaactt
tctaattttccatctactcttagtgctgagggtaagacagtgagacagcccagtgtgata
tattcatggattcataataaacatgaacagattaagaatttcttgtcaaaacgggtgcta
ataatgtattttttcagtaagcacccagaggcctccattcaggctgttttctcagaggcc
caaatgcatatttgggctttggaaggtctctctcacttggtagcagcctcatttacagaa
gacagatttggagttgtccagactactctaccagcaattctcaatactttgttgacgctg
caggaggccgttgacaagtacttcaagcttcctcatgcttccagtaaaccaccgcggact
tcaggaacccttgtggatacttcttataaaacgttaagatttgccttcagagcatcacta
aaaactgccatctatcgaataactaccacatttggtgaacatctaaatgctgtgcaagca
tctgcagaacatcagaaaagacttcaacagttcttggagttcaaagagtag

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