Sturnira hondurensis: 118984975
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Entry
118984975 CDS
T07222
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
shon
Sturnira hondurensis
Pathway
shon03013
Nucleocytoplasmic transport
shon05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118984975 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118984975 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shon03019
]
118984975 (NDC1)
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118984975 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
118984975
NCBI-ProteinID:
XP_036899117
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MQRHRPQFLGPRWTLLRRDLFDTRRRILESRAAFGQVSPGQFLSAGPVQTKPRRNGLGPG
PGFAQAAFEAAPTGSSRGLPPFEPQWRAGSQCPASLKVGAAITMATVATQPCAGGSRDIL
WRVLGWRIVSSVVWSVLLLPICTTVFIVLSSIDLFHPIQWLSDSFNDLYSSRVIFYLLLL
SVVIIIISIFNVEFYKVVPSVPCSRLALVGKVVHPPQLLHSFVHAAMGMMVAWCAAVMAK
GRYSFLVVPCTRTESLDGPTAQTCLNEYHLFFLLAGAFMGYSYSLLYFINNMDYLPFPII
QQYKFLRFRRSLPLLVKHSCMESLFLIRNFCIVYYFLGHIPKAWISTAMDLQVDEQFHRP
LDTVSGLLNLSLLYHVWLCGVFLLTTWYISWILFKIYATEAHLFPVQPPFAEESDECLPK
VLNSSPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNDMT
QKLVLHQEAAATNGRVMSSSYTVEPKKANSPEETTFLTPTSSQMPRPSMTPLIKTSLLSS
KLSTPGVASPLGSPFGSSVVNRMAGIFDVNTCYGSPQGSQLVRRGPRLWTSASDQQMNEL
SNFPSTLSAEGKTVRQPSVIYSWIHNKHEQIKNFLSKRVLIMYFFSKHPEASIQAVFSEA
QMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRT
SGTLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcaccgcccccaatttctggggcctcgctggaccctgcttcggagggacctt
ttcgataccagaaggcgaattctggagtccagggccgcttttggacaagtgtctccaggg
caattcttgtctgctgggcctgtccagacgaaacctcgaaggaatggattggggcctggg
ccgggcttcgctcaggcggcgttcgaggcagcccctacggggtcctcccggggccttcct
ccctttgaaccacagtggcgggcgggctcacagtgtccagcatccctcaaagtaggggcc
gccatcaccatggccacggttgcgactcagccctgcgccggcgggtcgcgggacatcttg
tggcgcgttttgggctggaggatagtttcaagtgttgtctggtcagtgctgcttctaccc
atctgtaccacagtatttatagtcttaagcagcattgatttatttcatcctatacagtgg
ctgtctgattctttcaatgatctgtatagttcccgtgtaatcttttatctcctgctgctg
tcagtggtaataataataataagtattttcaatgtggaattttataaagttgtgccttcc
gtcccctgctccagactggcactggtggggaaggtcgtccatcctccgcagcttctgcac
tcgtttgttcacgctgcgatgggaatgatggtggcttggtgcgctgcggtgatggccaag
ggccggtacagtttcctcgtggttccctgcactcgtactgagagcttagatggccctact
gcacaaacctgcttaaatgaatatcatctgtttttcctacttgctggagcatttatgggc
tatagttatagcctcctttattttattaacaacatggactatcttccatttcccatcata
cagcaatacaagttcttgcgctttaggagatctttgcccttactagttaaacacagttgt
atggaatcactgttcctgattagaaatttctgcattgtgtattattttcttggccatatt
cccaaagcttggattagcactgctatggaccttcaagtagatgagcaatttcataggcct
cttgatactgtgagtggcctcttgaatctctcattactctaccacgtctggttatgtgga
gtctttctcctgacgacttggtacatctcatggatactcttcaaaatctatgctacagag
gctcatctgttccctgttcagccaccatttgcagaagagtcagatgaatgcctcccaaaa
gttttaaacagcagtcctcccctcattataaagtatttggccttgcaggacctgatgttg
ctttctcaatattctccttcacgaagacaagaagtttttagtcttagccaaccaggtgga
cacccccacaattggacagccatttcaagggagtgtttaaatcttctcaatgatatgact
cagaagctggttctccaccaagaagctgctgctaccaatggaagggtaatgtcttcatca
tacactgtggaacccaagaaagcgaattctccagaagaaactacatttttgacccccacg
tctagccagatgcctcggccttcaatgacaccgttaattaagacatcactgttgtcttcg
aaattatctacacctggtgttgccagcccccttggatctccatttggctctagtgtagtg
aatcggatggctgggatttttgatgtaaacacctgctatggctcacctcaaggttctcag
ctagtaagaagagggccacgattatggacttctgcttctgaccagcaaatgaatgaactt
tctaattttccatctactcttagtgctgagggtaagacagtgagacagcccagtgtgata
tattcatggattcataataaacatgaacagattaagaatttcttgtcaaaacgggtgcta
ataatgtattttttcagtaagcacccagaggcctccattcaggctgttttctcagaggcc
caaatgcatatttgggctttggaaggtctctctcacttggtagcagcctcatttacagaa
gacagatttggagttgtccagactactctaccagcaattctcaatactttgttgacgctg
caggaggccgttgacaagtacttcaagcttcctcatgcttccagtaaaccaccgcggact
tcaggaacccttgtggatacttcttataaaacgttaagatttgccttcagagcatcacta
aaaactgccatctatcgaataactaccacatttggtgaacatctaaatgctgtgcaagca
tctgcagaacatcagaaaagacttcaacagttcttggagttcaaagagtag
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