Sturnira hondurensis: 118985276
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Entry
118985276 CDS
T07222
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
shon
Sturnira hondurensis
Pathway
shon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118985276 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shon03041
]
118985276 (SF3B1)
03036 Chromosome and associated proteins [BR:
shon03036
]
118985276 (SF3B1)
Spliceosome [BR:
shon03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
118985276 (SF3B1)
Complex B
118985276 (SF3B1)
Complex C
U2 SnRNP specific factors
118985276 (SF3B1)
Chromosome and associated proteins [BR:
shon03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
118985276 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
118985276
NCBI-ProteinID:
XP_036899592
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattgccaagactcacgaagatatcgaagcacagattcgagaaatccaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatatacggtggaagtgacagcagatttgctggatatgtgacatcaattgctgca
actgaacttgaagatgatgatgatgactactcttcatctacaagtttgctcggtcagaag
aagccaggatatcatgcccctgtggcgttgcttaatgatataccacagtcaacagaacag
tatgatccatttgcggagcaccgacctccaaagattgcagaccgagaagatgaatacaaa
aagcacaggcggaccatgataatttccccagaacgtcttgatccttttgcagatggaggg
aaaacccctgaccctaaaatgaatgctaggacttacatggatgtaatgcgggaacagcat
ttgactaaagaagagagagaaattaggcaacagctagcagaaaaagctaaagctggagaa
ctaaaagtcgtcaatggggcagcagcatcccagcctccctcaaaacgaaaacgacgctgg
gatcagacagctgatcagactcctggtgccactcccaagaagctgtcaagttgggatcaa
gcagagacccctggacatacaccttctttaagatgggatgagacaccaggtcgtgcaaag
ggaagcgagactcctggagcaaccccaggctcaaaaatatgggatcctacacctagccac
acaccagcgggagctgctactccaggacggggtgatacaccaggtcatgcaacaccaggc
catggaggcgcaacttccagtgctcgtaaaaacagatgggatgagacccccaaaacagaa
agagatactcctggacatggaagtggatgggctgagacgcctcgaacagatcgaggtgga
gattcaattggtgaaacacccactcctggagccagtaaaagaaagtcacgttgggatgaa
acaccagctagtcagatgggaggaagcactcctgttctgacccctggaaaaacaccaatt
ggcacaccagccatgaacatggctacccctactccaggtcacataatgagtatgactcct
gaacagcttcaagcttggcggtgggagagagaaattgatgagagaaatcgcccactttct
gatgaagagttagatgctatgttcccagaaggatataaggtactccctcctccagccggt
tatgttcctattcgaactccagctcgaaagctgacagcaactccaacacctttgggtggt
atgactggtttccacatgcaaacagaagacagaactatgaaaagtgttaatgatcaacca
tctggaaatcttccatttttaaaacctgatgatattcagtacttcgataaactcttggtt
gatgttgatgaatcaacacttagtccagaagagcagaaagagagaaaaataatgaagttg
cttttaaaaattaaaaatggaacacctccaatgagaaaggctgcattgcgtcagattact
gataaagctcgtgaatttggagctggtcctttgtttaatcagattcttcctcttctgatg
tctcctacacttgaggatcaagaacgtcatttacttgtcaaagttattgatagaatatta
tacaaacttgatgacttagttcgaccatatgtgcacaagatccttgtggtcattgaacca
ttgttgattgatgaagattactatgctagagtggaaggccgagagattatttctaatttg
gcaaaggctgctggtctggctactatgatctctaccatgagacctgatatagataacatg
gatgaatatgttcgtaacaccacagccagagcttttgctgttgtagcttctgccctgggc
attccttcattattgcccttcttaaaagctgtttgcaaaagcaagaagtcctggcaagca
agacacactggtattaagattgtacagcagatagctattcttatgggctgtgccattttg
ccacatctgagaagtttagttgaaatcattgaacatggtcttgtggatgagcagcagaaa
gttcggactatcagtgctttggccattgctgccttggctgaagcagcaactccttatggt
atcgaatctttcgattccgtgttaaagcctctatggaagggtatccgccaacacagagga
aagggtctggctgcctttttaaaggctattgggtatcttattcctctcatggatgcagaa
tatgccaactactacactagagaagtgatgttaatccttattagagaattccaatctcct
gatgaagaaatgaagaaaattgtgttgaaggtggtaaagcagtgctgtggaacagatggt
gtggaagcaaactacattaaaacagagatccttcctcctttttttaaacacttctggcaa
cacagaatggctttagatagaagaaattaccgacagttagttgatactactgtggaattg
gcaaacaaagtaggtgcggcagaaattatatccaggattgtggatgatctgaaggatgaa
gctgaacagtacagaaaaatggtgatggaaacaattgagaagattatgggcaacttggga
gcagcagatattgatcataaacttgaagaacaactgattgatggtattctttatgctttc
caagaacagactacagaggactcagtaatgttgaacgggtttggcacagtggtcaatgct
cttggcaaacgagttaagccttacttgcctcagatctgcggtacggttttgtggcgttta
aataacaaatcagccaaagtgaggcagcaggcagctgacttgatctctcgtactgctgtt
gtcatgaagacttgccaggaggaaaagttgatggggcacttgggtgttgtcttgtatgag
tatttgggtgaagagtaccccgaagtattgggaagcattcttggagcactgaaggccatt
gtaaatgtaataggtatgcataagatgaccccaccaattaaggatctgctgcctagactc
actcccatcctaaagaacaggcatgaaaaagtacaggagaattgtattgatcttgttgga
cgtattgctgacaggggagctgaatatgtgtcagcaagggaatggatgaggatttgcttt
gagcttttagagctcttaaaagctcacaaaaaagctattcgtagagccacagtcaacaca
tttggttatattgcaaaggccattggccctcatgacgtattggctacacttttaaacaac
cttaaagttcaggaaaggcagaacagagtttgtactactgtggcaatagctattgtcgct
gaaacgtgttcacccttcacagtactacctgccttaatgaatgaatacagagttcctgaa
ctgaatgttcaaaatggagtgttaaaatcactttcctttttgtttgaatatattggtgaa
atgggaaaggactacatttatgctgtaacaccattacttgaggatgctttaatggacagg
gaccttgtacacaggcagacagctagtgcggttgtacagcacatgtcacttggggtttat
ggatttggttgtgaagattcgctgaatcacttgttaaactatgtatggcccaatgtgttt
gagacatcgccccatgtaattcaggcagttatgggagccctggagggcttgagagttgct
atcggaccatgcagaatgttacagtattgtttacagggtttgtttcacccagcccggaag
gtcagagatgtgtattggaaaatttacaactccatctacattggttcacaggatgctctc
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttacgaactt
gactatatcttataa
DBGET
integrated database retrieval system
