Sturnira hondurensis: 118986560
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Entry
118986560 CDS
T07222
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
shon
Sturnira hondurensis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shon03036
]
118986560 (HFM1)
Enzymes [BR:
shon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118986560 (HFM1)
Chromosome and associated proteins [BR:
shon03036
]
Eukaryotic type
Meiosis-specific proteins
Others
118986560 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
Hfq
Motif
Other DBs
NCBI-GeneID:
118986560
NCBI-ProteinID:
XP_036901423
LinkDB
All DBs
Position
Unknown
AA seq
1435 aa
AA seq
DB search
MSKSNDSFFSLDNLFFEKLDEAENYSDNGKSLDWFPPPAPLVSEIPDTQTLEEEIENHKP
LGMGKRQKMLTSNLKITDESTNYISPTQKFQFAFPSNNYGEDGVNFGGTDKNGLSHVSGK
LTYGSSQKFKNHFGTEIAPEKNIPDDTKLINSAEEKGESASVCRKRLFKISDNMHRSAYS
NDIANLDSHVGPGEIVQTEMNKGKSWKCSNSKQKHQYSDVNMFIASDAFPDSEIRGVFKV
PSFSIATQPHEVQGVTENDLKAITEIPAQFRGIFKEFPYFNYIQSKAFDDLLYTDKNFVI
CAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVYMAPIKALCSQRFDDWKEKFGPIGLKC
KELTGDTLMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHVIKDENR
GPTLEVVVSRMKTVQSLSHTLENTSSVIPMRFVAVSATIPNAEDIAEWLSNGERPAVCLK
MDERHRPVRLRKVVLGFPCCSNQTEFKFDLALNYKIANVIQTYSDQKPTLVFCATRKGVQ
QAASVLVKNAKFIMTVEQKQRLQKYTYSIRDSKLRDFFIHGIAYHHAGMELSDRKVVEGA
FTVGDLPALFTTSTLAMGVNLPAHLVIIKSTMHYAGGMFEEYSETDILQMIGRAGRPQFD
TTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALEWIRS
TLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLKNLNDLSSLDLITMDEGVNFKPTETG
RLMAWYYITFETVKKFCTISGKETLLDLVTMIASCKEFLDVQLRINEKKTLNNLNKNPSQ
ITIRFPMEGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTAKIFRSGSRITRWLSEFVAL
QEKKFAVLLNSLILTKCFRCKLWENSLHVSKQLEKIGITLSNAMVNAGLTSFKKIEETDA
RELELILNRHPPFGTQIKEIVMYLPKYELEIEQIARYSDTVAEILVTIKLRNFEQLQTRR
TAPDSHYVTLIIGDADNQLVFKHKIIDSVLLKAGSWAKKVDVKRALKSEELSINLISSEY
VGLDIQKKFTVFYLGPKRSGNEIIMPQKSETEISHSKHSGRSTVAEPNKGTTTRKKPGNR
ECNHHCKNKQTCGHDCCKIGVAQKSEMKGPTISSYLSDLRNRNASSLPPVKRLKMQMNKS
QSVDLKDFCFTPKASLPNISRSEYINIPELSIMEERDQHELCTNAQQEICEYQDQEVLNV
NFELGNEVWDDFDDENLVQATTFSADNKKIKTSGFGNTLSSSTRGSNLSCQESKSKFQRE
MSNSFVVSHMEPDIYLSDSAMSKFGASSVMKLPRQDENTSIVHLQKGKQQSLSPEIERLY
FPHSEKKPNSSNFFKKVDFFTRNSECKNQIDFSRYHPDDEADEMKSFLGIFDGIF
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatcaaatgactcctttttttctttggataatttgttttttgaaaaactggat
gaagctgaaaactattcagacaatggaaaatcattggattggtttcccccacctgctcca
ttggtttcagaaattccagatactcagacattagaagaagaaatagaaaatcataaacca
ttaggtatgggaaagaggcaaaaaatgttaacatcaaatttaaagataactgatgaaagc
acaaattatatttcaccaacacaaaaattccaatttgcctttccctctaataattatgga
gaagatggtgtaaattttggagggacagataaaaatggtttatcacatgtttctggcaag
ctgacatatggttcttctcagaaattcaaaaatcactttggcactgagatagcacctgag
aaaaatattccggatgacacaaaattaattaattctgcagaagaaaaaggagagagtgca
tcagtctgccgaaaaagattgtttaaaatatctgacaatatgcataggagtgcttattct
aatgacattgcaaacttggattctcatgttggcccaggggaaattgtccaaacagaaatg
aacaaagggaaatcatggaaatgtagcaacagtaagcagaaacatcagtattcagatgtt
aacatgtttatagcaagtgatgcttttcctgattctgaaatcagaggtgtattcaaagta
ccatctttttccattgctacacagcctcatgaagttcagggagtaacagaaaatgatttg
aaagctatcacagaaattccggcacaatttagaggtattttcaaagaattcccatatttc
aactatatacagtccaaagcctttgatgatcttctttacacagataagaattttgtgatt
tgtgctccaactggttctgggaaaactgtagtgtttgaacttgctataacaagattgtta
atggaagtaccattgccatggtcaaatattaaaattgtttacatggcaccaataaaagcc
ctgtgtagtcagcgttttgatgactggaaagaaaaatttggaccaataggattgaagtgt
aaagaactcactggagatacactaatggatgacctgtttgagattcagcatgcccatatt
attatgacaactccagagaaatgggatagcatgactaggaaatggagagacaactctttg
gtccaactggttcgactgtttctcattgatgaggtacatgttataaaagatgaaaatcgt
ggaccaactcttgaagttgtagttagcagaatgaaaactgtgcaatctttatctcatacc
ttagaaaataccagttctgttattccaatgagatttgtagctgtgtctgcaacaattcca
aatgctgaggatattgcagaatggctttcaaatggtgaaagacctgctgtatgtctgaaa
atggatgagagacatagaccagtgagacttcggaaagtggtccttggatttccctgctgt
agtaaccaaactgaattcaagtttgatttagccctcaactataaaatcgccaatgttata
cagacatactctgatcagaaacccacacttgtgttttgtgcaacaaggaaaggcgtgcaa
caagctgcttctgttcttgtgaaaaatgctaaatttattatgactgtggaacagaaacag
aggttacagaagtatacatattccataagagattcaaaactgagagatttcttcatacat
ggtattgcttatcatcatgctggtatggaactgtcggataggaaagtagttgaaggagct
tttactgttggagatctaccagctctttttactaccagtactttagctatgggagtaaat
ttgcctgctcacttagtaattataaaatctacaatgcattatgctggagggatgtttgaa
gagtacagtgaaacagatattctacaaatgattgggagagctggccgacctcaatttgac
actacagccactgcagttattatgactcggttaagtacaaaagagaagtatattcagatg
ttagcttgtagtgacactgtagaaagcagtttacacagacatcttattgagcatttaaat
gcagaaatagtattgcataccatcacagatgtaaatattgctttggaatggatacgatca
actttgctttatatcagagccttgaaaaatccatctcattatggttttgcatctggcttg
aacaaagatggaattgaagcaaaattacaagaattatgtttgaagaatctgaatgattta
tcatctctggacttgataacaatggatgaaggtgttaatttcaaaccaactgagacagga
aggttgatggcttggtattatattacatttgaaacagtgaagaaattttgtacaatcagt
ggaaaagaaactttattggatttggtcacaatgatagccagctgcaaggaatttctagat
gtacaattaaggataaatgaaaagaaaactctgaataatttgaacaaaaatccaagtcaa
ataactatcagatttcctatggaaggaagaattaaaacaagagaaatgaaagtaaattgt
cttattcaggctcagttgggatgcattcccatacaagactttgctttgacacaagatact
gcaaagattttcagaagtggctcacggattacaagatggctgtcagagtttgtggctctt
caagaaaagaagtttgctgtactattgaacagtttgattttaactaagtgttttagatgt
aaactttgggaaaattctctgcatgtgtccaaacagctggaaaaaattggtataacattg
tcaaatgcaatggttaacgcaggtttgacttcctttaaaaaaatagaagaaacagatgca
agggaacttgaactgattttaaatagacatcccccctttggaactcagataaaagaaata
gtgatgtatcttccaaaatatgaactcgaaatagaacagattgcaaggtacagtgacact
gtggcggagatattagtgaccattaaattaagaaactttgaacagctacaaactagaaga
acagcaccagactctcactatgttaccttaatcataggcgatgcagataatcaactggtt
tttaagcacaaaattatagattctgttttgctgaaagctggaagttgggctaaaaaggtt
gatgttaagagagctcttaaatctgaagaacttagcataaatctaattagctctgaatat
gttggacttgatattcagaagaaattcacagtcttttacttaggacccaagaggtctgga
aatgaaataattatgccccaaaaatcagaaacagagatttcccattctaaacattcaggt
agatctactgtagcagaacccaataaaggaacgactacccgcaaaaaacctggaaaccga
gagtgtaaccatcactgtaaaaataaacagacatgtggacatgactgctgtaaaattgga
gtggcacagaaatcagaaatgaaagggccaacaatttcttcatatttatccgatttaaga
aacagaaatgcttcatctcttcctccagttaaacgtctcaagatgcaaatgaataaatcg
cagagtgtggaccttaaggatttttgttttactccaaaagcttctcttcctaatatatca
aggtcagaatacataaacatacctgaattatctatcatggaggagagggatcagcatgaa
ctctgtacaaatgctcaacaagaaatatgtgaatatcaagaccaagaagttttgaatgtg
aactttgaattgggaaatgaagtttgggatgattttgatgatgaaaacttagtacaagct
actaccttttcagctgataataagaagataaaaacatcaggatttggaaacactttgagt
tcaagtaccaggggaagtaatctatcctgccaagagtcaaagagcaaattccaaagagaa
atgtcaaacagttttgttgtatcacatatggagccagatatttatttatcagactctgcc
atgtccaagtttggtgcatcctccgtgatgaaactgcctcgacaagatgaaaatacaagt
attgtccatttacaaaaaggaaaacaacaaagtctgtcaccagagattgaaagactatac
tttcctcactctgaaaaaaaaccgaattcttcaaattttttcaaaaaagtggatttcttt
actagaaacagtgaatgtaaaaaccaaattgatttcagtaggtatcatcctgatgatgaa
gctgatgaaatgaagtcttttctgggaatatttgatggtattttctaa
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integrated database retrieval system
